Protein Alignment: Prdm13 and CG8388

• Sequence 1: NP_648032.1
• Gene: Prdm13
• FlyBaseID: FBgn0035687
• Length: 465
• Species: Drosophila melanogaster
• Sequence 2: NP_611075.1
• Gene: CG8388
• FlyBaseID: FBgn0034062
• Length: 572
• Species: Drosophila melanogaster
• Alignment Length: 376
• Identity: 77/377 (20%)
• Similarity: 118/377 (31%)
• Gaps: 140/377 (37%)

  Fly   175 IQGNSRYMCHLCHLTFETPHPLKIHL---------ALGCGRSAMD----ILWMRLHY-------- 218
            |:.:.:..||:|:|..|....:..|:         |:.|.|..:.    :..:|.|.
  Fly   226 IREHYKVQCHICNLPMEDFSEMLAHVRREHKQRGYAMCCNRKFLKRGVLVDHLRRHQDPETFKCS 290

  Fly   219 ----------ALKAAARSHTETQHSPIPATSSTSSA----------SPTHSPPPQMPPRFSAFRP 263
                      :|:...|.|.......:......|.|          ..||.|..|.
  Fly   291 ICGRVMGHRRSLELHMRMHEIKSRGRLYRCEQCSKAFYSAVVYERHKLTHIPREQW--------- 346

  Fly   264 IAALTQSLPMVPVTTAATPLSYLPSMSMATAPLSTNPMNAAAQI-----------EAIVSNM--- 314
                     .||.|....  :| ||.......:....:|..|:|           ||:..:|
  Fly   347 ---------KVPCTHCEK--TY-PSQYTMQQHVKLVHLNLYAKICDVCGKSIRGREALARHMEEH 399

  Fly   315 -GASKQGHLCIYCGKVYSRKYGLKIHIR-THT--GFKPLKCKFCLR--PFGDPSNLNKHVRLHLQ 373
             |..:....|..|..:.:.||||..||: .||  ..:|::|:|||:  |     :|..|......
  Fly   400 TGGPQAAIKCHLCDSMLTTKYGLARHIKMMHTAENLQPMQCEFCLKICP-----SLQAHQHHIKY 459

  Fly   374 THPSSSAGVADGGASGADMDGDVDIEGETDADYQCHVCHKSFPRRRDLQRHMETRHG-------- 430
            ||                         .|...:||.:|.|:|.|..:|:.||.|..|
  Fly   460 TH-------------------------NTARSHQCPMCEKAFKRPNELKEHMTTHTGEVLYTCPH 499

  Fly   431 -------GHHSHSH---------SESRSS--STSTSSTTTMTATV--TTST 461
                   ..:.|:|         .|:|..  :.|..|.|.:..:|  ||.|
  Fly   500 CPQTFNSNANMHAHRKKVHRKEWEENRHKRLNRSRKSDTIIAVSVRKTTET 550

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Prdm13	NP_648032.1	COG5048	280..>380	CDD:227381	30/120 (25%)
		C2H2 Zn finger	323..343	CDD:275368	8/21 (38%)
		zf-H2C2_2	336..358	CDD:290200	11/27 (41%)
		C2H2 Zn finger	351..371	CDD:275368	7/22 (32%)
		zf-C2H2	406..427	CDD:278523	9/21 (43%)
		C2H2 Zn finger	408..427	CDD:275368	8/19 (42%)
CG8388	NP_611075.1	zf-AD	<21..77	CDD:285071
		C2H2 Zn finger	264..281	CDD:275368	3/17 (18%)
		C2H2 Zn finger	289..309	CDD:275368	2/20 (10%)
		C2H2 Zn finger	320..340	CDD:275368	3/20 (15%)
		C2H2 Zn finger	350..369	CDD:275368	4/22 (18%)
		C2H2 Zn finger	440..461	CDD:275368	8/26 (31%)
		C2H2 Zn finger	469..489	CDD:275368	9/20 (45%)
		C2H2 Zn finger	497..515	CDD:275368	2/18 (11%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			P	PTHR24403
RoundUp	0	0.000	Not matched by this tool.
	1	1.100