| Sequence 1: | NP_648032.1 | Gene: | Prdm13 / 38713 | FlyBaseID: | FBgn0035687 | Length: | 465 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001163089.2 | Gene: | rgr / 35843 | FlyBaseID: | FBgn0267792 | Length: | 889 | Species: | Drosophila melanogaster |
| Alignment Length: | 178 | Identity: | 43/178 - (24%) |
|---|---|---|---|
| Similarity: | 64/178 - (35%) | Gaps: | 26/178 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 297 STNPMNAAAQIEAIVSNMGASKQGHLCIYCGKVYSRKYGLKIHIRTHTGFKPLKCKFCLRPFGDP 361
Fly 362 SNLNKHVRLHLQTHPSSSAGVADGGASGADMDGDVDIEGET-DADYQCHVCHKSFP--------R 417
Fly 418 RRDLQR-----------HMETRHGGHHSHSHSESRSSSTSTSSTTTMT 454 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Prdm13 | NP_648032.1 | KREPA | <250..>352 | CDD:483960 | 13/54 (24%) |
| C2H2 Zn finger | 323..343 | CDD:275368 | 4/19 (21%) | ||
| C2H2 Zn finger | 351..371 | CDD:275368 | 8/19 (42%) | ||
| zf-C2H2 | 406..427 | CDD:395048 | 10/39 (26%) | ||
| C2H2 Zn finger | 408..427 | CDD:275368 | 9/37 (24%) | ||
| rgr | NP_001163089.2 | MADF | 334..425 | CDD:214738 | |
| MADF | 466..556 | CDD:214738 | |||
| MADF_DNA_bdg | 595..682 | CDD:463144 | 4/12 (33%) | ||
| C2H2 Zn finger | 691..711 | CDD:275368 | 4/19 (21%) | ||
| C2H2 Zn finger | 719..739 | CDD:275368 | 8/19 (42%) | ||
| COG5048 | 742..>824 | CDD:227381 | 17/83 (20%) | ||
| C2H2 Zn finger | 747..767 | CDD:275368 | 1/21 (5%) | ||
| C2H2 Zn finger | 775..795 | CDD:275368 | 7/19 (37%) | ||
| C2H2 Zn finger | 803..818 | CDD:275368 | 1/14 (7%) | ||
| C2H2 Zn finger | 831..851 | CDD:275368 | 2/10 (20%) | ||
| C2H2 Zn finger | 859..877 | CDD:275368 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||