DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prdm13 and Zfp646

DIOPT Version :10

Sequence 1:NP_648032.1 Gene:Prdm13 / 38713 FlyBaseID:FBgn0035687 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_766337.2 Gene:Zfp646 / 233905 MGIID:3665412 Length:1788 Species:Mus musculus


Alignment Length:352 Identity:79/352 - (22%)
Similarity:118/352 - (33%) Gaps:109/352 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 AREDEIVAWFGEELVLLMGIPF---LTPLNIQGNSR------YMCHLCHLTFETPHPLKIHLALG 203
            |::|      |||   ..|||.   ..|.|:..:.|      :.|..|...|.....|:.|:...
Mouse    34 AKQD------GEE---ADGIPHPYGSHPENLANHQRNHETLFFPCTTCGKDFSNRLALQSHMRTH 89

  Fly   204 CGRSAMDILWMRLH---YALKAAARSHTETQHSPIPATSS--------------TSSASPTHSPP 251
            ...|      .|.|   :|::.|....:||.     ||.|              |.....||...
Mouse    90 APES------HRRHGPPHAMETAPHLGSETM-----ATDSWGQRLGSGEGWENQTKLVRETHDWE 143

  Fly   252 PQMPPRFSAFR---PIAALTQSLPMVPVTTAATPLSYLPSMSM-ATAPLSTNPMNAAAQI----- 307
            ....||.::..   |.....|.|.|.|.:...| ..::|::|. ..:||.|...|..:.:     
Mouse   144 SGADPRAASGTWEDPPTKQRQGLEMQPDSKGGT-ADWVPAVSSEGASPLPTPASNLLSNLEQYLA 207

  Fly   308 EAIVSNMGA----------SKQGHLCIYCGKVYSRKYGLKIHIRTHT-GFKPLKCKFCLRPFGDP 361
            |::|:...|          .::.:.|..|||.|.....|..|.::|| |..|  |..|.:.|.:.
Mouse   208 ESVVNFTEAQEPTEPLPTEGERKYRCSECGKTYKHAGSLTNHRQSHTLGIYP--CSICFKEFSNL 270

  Fly   362 SNLNKHVRLHLQTHPSSSAGVADGGASGADMDGDVDIEGETDADYQCHVCHKSFPRRRDLQRHME 426
            ..|..|.|||.|..|                             |.|..|.::|...|||..|.:
Mouse   271 MALKNHSRLHAQYRP-----------------------------YHCPHCPRAFRLPRDLLEHQQ 306

  Fly   427 TRHGGHH-----------SHSHSESRS 442
            :..|...           ::.|::.||
Mouse   307 SHEGLKQEQPWEDKEMPTTNGHADERS 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prdm13NP_648032.1 KREPA <250..>352 CDD:483960 28/121 (23%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..371 CDD:275368 6/19 (32%)
zf-C2H2 406..427 CDD:395048 8/20 (40%)
C2H2 Zn finger 408..427 CDD:275368 7/18 (39%)
Zfp646NP_766337.2 C2H2 Zn finger 10..31 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..48 8/22 (36%)
C2H2 Zn finger 69..89 CDD:275368 5/19 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 139..196 15/57 (26%)
C2H2 Zn finger 233..253 CDD:275368 7/19 (37%)
C2H2 Zn finger 260..280 CDD:275368 6/19 (32%)
C2H2 Zn finger 288..308 CDD:275368 7/19 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 306..360 4/28 (14%)
C2H2 Zn finger 368..388 CDD:275368
C2H2 Zn finger 395..415 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 416..449
C2H2 Zn finger 459..479 CDD:275368
C2H2 Zn finger 486..506 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 509..531
C2H2 Zn finger 568..588 CDD:275368
C2H2 Zn finger 608..628 CDD:275368
C2H2 Zn finger 635..655 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 651..712
C2H2 Zn finger 808..828 CDD:275368
C2H2 Zn finger 835..855 CDD:275368
C2H2 Zn finger 868..886 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 889..916
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 956..976
C2H2 Zn finger 1037..1057 CDD:275368
C2H2 Zn finger 1064..1084 CDD:275368
C2H2 Zn finger 1172..1192 CDD:275368
C2H2 Zn finger 1199..1219 CDD:275368
C2H2 Zn finger 1227..1247 CDD:275368
C2H2 Zn finger 1268..1285 CDD:275368
C2H2 Zn finger 1295..1315 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1351..1386
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1398..1439
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1455..1489
C2H2 Zn finger 1500..1518 CDD:275368
C2H2 Zn finger 1526..1544 CDD:275368
C2H2 Zn finger 1552..1572 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1579..1629
C2H2 Zn finger 1642..1662 CDD:275368
C2H2 Zn finger 1669..1689 CDD:275368
zf-H2C2_2 1681..1706 CDD:463886
C2H2 Zn finger 1697..1717 CDD:275368
C2H2 Zn finger 1726..1746 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1744..1788
Blue background indicates that the domain is not in the aligned region.

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