DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Prdm13 and sup-37

Sequence 1:NP_648032.1 Gene:Prdm13 FlyBaseID:FBgn0035687 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_001256110.1 Gene:sup-37 WormBaseID:WBGene00006342 Length:940 Species:Caenorhabditis elegans

Alignment Length:194 Identity:37/195 (19%)
Similarity:63/195 (32%) Gaps:79/195 (41%)


  Fly   310 IVSNMGASKQGHLCIYCGKVYSRKYGLKIHIRT-HTGFKPLKCKFCLRPFGDPSNLNKHV----- 368
            |:||...|.| ..|:.||...:....::|||:| |..:.|.:|..||......:.:.:|:     
 Worm    83 IISNHTPSMQ-LSCVECGVTKANSEEMEIHIKTEHLKWLPFQCPMCLVERASDAQMREHLHSSHQ 146

  Fly   369 --------------------------------RLHLQTHPSSSAGVADGGASGADMDGDVDIEGE 401
                                            |::.:.|||||...:....:             
 Worm   147 KNMSKFIYVDNVKAKRRLQILMDSAFSLNVSERVNAKNHPSSSTSASPYSPT------------- 198

  Fly   402 TDADYQCHVCHKSFPRRRDLQRHMETRHGGHHSHSHSESRSSSTSTSSTTTMTATVTTSTSKSS 465
                                     :.|.|.:| |.|..|::|||..|.|: .||.:...:.::
 Worm   199 -------------------------SYHRGMNS-SPSSGRNTSTSNGSATS-AATASAQAAATA 235

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Prdm13NP_648032.1 COG5048 280..>380 CDD:227381 24/108 (22%)
C2H2 Zn finger 323..343 CDD:275368 7/21 (33%)
zf-H2C2_2 336..358 CDD:290200 9/23 (39%)
C2H2 Zn finger 351..371 CDD:275368 5/57 (9%)
zf-C2H2 406..427 CDD:278523 0/21 (0%)
C2H2 Zn finger 408..427 CDD:275368 0/19 (0%)
sup-37NP_001256110.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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