Protein Alignment: Prdm13 and lin-13

• Sequence 1: NP_648032.1
• Gene: Prdm13
• FlyBaseID: FBgn0035687
• Length: 465
• Species: Drosophila melanogaster
• Sequence 2: NP_498678.3
• Gene: lin-13
• WormBaseID: WBGene00003002
• Length: 2248
• Species: Caenorhabditis elegans
• Alignment Length: 325
• Identity: 67/326 (21%)
• Similarity: 100/326 (31%)
• Gaps: 127/326 (39%)

  Fly   222 AAARSHTETQHSPI------------PATSSTSSASPTHSPPPQMPPRFSAFRPIAALTQSLPMV 274
            ||.||..:|..|.:            |:..::.:.:...:||.|.|||    |.:.|
 Worm  1857 AAPRSSLQTNGSSMGSVTTNGGRVVRPSPPNSMNVTLRRAPPQQAPPR----RIVIA-------- 1909

  Fly   275 PVTTAATPLSYLPSMSMATAPLSTNPM-NAAA----------------QIEAIVSNMGASKQGHL 322
                             .:||.:||.: |..|                :.:..:.:|.:|.....
 Worm  1910 -----------------NSAPNNTNVLRNHVAVTTKCQFKDCDKVLHSEFDRQLHSMHSSNSSWF 1957

  Fly   323 CIYCGKVYSRKYGLKIH-IRTH----------TGFKP----LKC--KFCLRP-FGDPSNLNKHVR 369
            |..||.....:..|.:| |:.|          ..||.    |||  :.|..| |..|....||:|
 Worm  1958 CRQCGHSPKSEIDLFLHYIQVHLKPAYDKHQSNSFKSNVFHLKCPIRSCTSPEFQSPKAFEKHMR 2022

  Fly   370 L-------------------------HLQTHPS--SSAGVADGGASGADMDGDVDI-----EGET 402
            .                         |.|.|.|  .|.|.   .||...:.|.:.:     :..|
 Worm  2023 TAHAAELPFEASCCDARFASKALCVKHDQEHASFLDSNGT---DASCCPICGSLSMWSLPKDPHT 2084

  Fly   403 DA----------DYQ--CHVCHKSFPRRRDLQRHMETRH--GGHHSHSHSESRSSSTSTSSTTTM 453
            |.          ||:  |..|.|.||  .|:.:.....|  ..|....|..:...:..|:.|.|:
 Worm  2085 DCLQSHIIRHGLDYRSSCRQCLKQFP--ADVNQDQVIAHILDTHGMSMHGNTFHCNLCTTGTKTV 2147

  Fly   454  453
             Worm  2148  2147

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Prdm13	NP_648032.1	COG5048	280..>380	CDD:227381	32/162 (20%)
		C2H2 Zn finger	323..343	CDD:275368	6/21 (29%)
		zf-H2C2_2	336..358	CDD:290200	11/40 (28%)
		C2H2 Zn finger	351..371	CDD:275368	8/48 (17%)
		zf-C2H2	406..427	CDD:278523	7/23 (30%)
		C2H2 Zn finger	408..427	CDD:275368	6/19 (32%)
lin-13	NP_498678.3	C2H2 Zn finger	961..982	CDD:275368
		C2H2 Zn finger	986..1003	CDD:275368

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			O	PTHR24403
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100