DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp65Aa and Lcp65Af

DIOPT Version :8

Sequence 1:NP_477280.1 Gene:Lcp65Aa / 38709 FlyBaseID:FBgn0020645 Length:102 Species:Drosophila melanogaster
Sequence 2:NP_477274.1 Gene:Lcp65Af / 45017 FlyBaseID:FBgn0020639 Length:100 Species:Drosophila melanogaster

Alignment Length:100 Identity:47/100 - (47%)
Similarity:67/100 - (67%) Gaps:5/100 - (5%)


  Fly     1 MKSILVLACLLSALCLAAAAPDAEIVDLVSDVNADSYSYKFETSDGTKQEQHGSLKSLGPEEDAL 65
            ||.::|...|     .|.|..|.:|:...|||...|::|.:|||||:..:..|.||::|.:|:||
  Fly     1 MKFLIVFVAL-----FALAVADVQILKQESDVGPVSFNYGYETSDGSSAQAAGQLKNVGTDEEAL 60

  Fly    66 QVAGSFSFVGDDGQTHAISYVADENGFQPQGEDIP 100
            .|.|::|||.|||||::|:|.|||||:||||..:|
  Fly    61 NVKGTYSFVADDGQTYSIAYTADENGYQPQGAHLP 95

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Lcp65AaNP_477280.1 Chitin_bind_4 37..92 CDD:278791 29/54 (54%)
Lcp65AfNP_477274.1 Chitin_bind_4 32..87 CDD:278791 29/54 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C131275051
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR10380
RoundUp 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.030

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