DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp65Aa and Lcp4

DIOPT Version :10

Sequence 1:NP_477280.1 Gene:Lcp65Aa / 38709 FlyBaseID:FBgn0020645 Length:102 Species:Drosophila melanogaster
Sequence 2:NP_476622.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster


Alignment Length:96 Identity:32/96 - (33%)
Similarity:50/96 - (52%) Gaps:10/96 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVLACLLSALCLAAAAPDAEIVDLVSDVNADSYSYKFETSDGTKQEQHGSLKSLGPEEDALQVAG 69
            ::|.|.|.|  |.||..:.|:.:||:||.||.:..|....:|:.....|.:..        .:.|
  Fly     4 ILLVCALVA--LVAANENPEVKELVNDVQADGFVSKLVLDNGSAASATGDVHG--------NIDG 58

  Fly    70 SFSFVGDDGQTHAISYVADENGFQPQGEDIP 100
            .|.:|..:|:...:||.|||||:|||.:.:|
  Fly    59 VFEWVSPEGEHVRVSYKADENGYQPQSDLLP 89

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AaNP_477280.1 Chitin_bind_4 37..92 CDD:459790 13/54 (24%)
Lcp4NP_476622.1 Chitin_bind_4 40..81 CDD:459790 12/48 (25%)

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