DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp65Aa and Lcp3

DIOPT Version :10

Sequence 1:NP_477280.1 Gene:Lcp65Aa / 38709 FlyBaseID:FBgn0020645 Length:102 Species:Drosophila melanogaster
Sequence 2:NP_476621.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster


Alignment Length:96 Identity:31/96 - (32%)
Similarity:49/96 - (51%) Gaps:10/96 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVLACLLSALCLAAAAPDAEIVDLVSDVNADSYSYKFETSDGTKQEQHGSLKSLGPEEDALQVAG 69
            ::|.|.|:|  |.||..:.|:.:||:||..|.:..|....||:.....|.:..        .:.|
  Fly     4 ILLVCSLAA--LVAANANVEVKELVNDVQPDGFVSKLVLDDGSASSATGDIHG--------NIDG 58

  Fly    70 SFSFVGDDGQTHAISYVADENGFQPQGEDIP 100
            .|.::..:|....:||.|||||:|||.:.:|
  Fly    59 VFEWISPEGVHVRVSYKADENGYQPQSDLLP 89

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AaNP_477280.1 Chitin_bind_4 37..92 CDD:459790 13/54 (24%)
Lcp3NP_476621.1 Chitin_bind_4 <46..81 CDD:459790 10/42 (24%)

Return to query results.
Submit another query.