DRSC/TRiP Functional Genomics Resources

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Protein Alignment: l(3)mbn and Lcp65Aa

Sequence 1:NP_729143.2 Gene:l(3)mbn FlyBaseID:FBgn0002440 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_477280.1 Gene:Lcp65Aa FlyBaseID:FBgn0020645 Length:102 Species:Drosophila melanogaster

Alignment Length:75 Identity:21/76 (28%)
Similarity:29/76 (38%) Gaps:29/76 (38%)


  Fly   568 SSATGDLYKFKYILDYNGHEETGGRNGDKQ-------------------GSYFAIGEDAVQRTIE 613
            |....|.|.:|:        ||.  :|.||                   ||:..:|:|.....|.
  Fly    30 SDVNADSYSYKF--------ETS--DGTKQEQHGSLKSLGPEEDALQVAGSFSFVGDDGQTHAIS 84

  Fly   614 YIANEFGFQP 623
            |:|:|.||||
  Fly    85 YVADENGFQP 94

Known Domains:


GeneSequenceDomainRegion External IDIdentity
l(3)mbnNP_729143.2 Chitin_bind_4 31..77 CDD:278791
Chitin_bind_4 575..621 CDD:278791 16/65 (25%)
Lcp65AaNP_477280.1 Chitin_bind_4 37..92 CDD:278791 16/65 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR10380
RoundUp 00.000 Not matched by this tool.
11.100

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