DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbn and Cpr47Ef

DIOPT Version :10

Sequence 1:NP_729143.2 Gene:l(3)mbn / 38701 FlyBaseID:FBgn0002440 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_610660.2 Gene:Cpr47Ef / 36194 FlyBaseID:FBgn0033603 Length:612 Species:Drosophila melanogaster


Alignment Length:228 Identity:80/228 - (35%)
Similarity:87/228 - (38%) Gaps:53/228 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   409 GISGVTANTPTGNVPSNGGGIAAGKAPGNPQA---------GGSGGIIGAGAPGGRKVSAGGIGS 464
            |..|.......|....:|||...|.|||.|.|         ||.||..|||...||..|.||.||
  Fly   271 GSGGGGGGAGGGGGYGSGGGSGRGGAPGGPGAPGGGGFGGQGGGGGYGGAGGGAGRGGSPGGPGS 335

  Fly   465 ---------GSAIGGVSGGSKAS-GNGGAIGSGSAIGGGATGSKASGFGFGSNIGGGVSGSKP-- 517
                     |.|.||..||.... |.|||.|:..:.|||..|.:..|.|||   |||..|..|  
  Fly   336 PGGGGFGGQGGAGGGYGGGGGGGRGGGGAPGAPGSPGGGGFGGQGGGGGFG---GGGGRGGAPGA 397

  Fly   518 ------SGFGSESKIGGPDSGSKALGFGS--------GSKIGGGITGT-KASGFGGEIGSGRGSA 567
                  .|:|.:...||...|....|.|.        ||..|||..|. ...||||  |.|||.|
  Fly   398 PGSPGGGGYGGQGGAGGGYGGGGGRGGGGAPGAPGAPGSPGGGGFGGQGGGGGFGG--GGGRGGA 460

  Fly   568 SSATGDLYKFKYILDYNGHEETGGRNGDKQGSY 600
            ..|.|.          .|....||:.|.  |.|
  Fly   461 PGAPGS----------PGGGGFGGQGGG--GGY 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbnNP_729143.2 Chitin_bind_4 575..621 CDD:459790 6/26 (23%)
Cpr47EfNP_610660.2 Chitin_bind_4 149..204 CDD:459790
Blue background indicates that the domain is not in the aligned region.

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