DRSC/TRiP Functional Genomics Resources

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Protein Alignment: l(3)mbn and Cpr47Ef

Sequence 1:NP_729143.2 Gene:l(3)mbn FlyBaseID:FBgn0002440 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_610660.2 Gene:Cpr47Ef FlyBaseID:FBgn0033603 Length:612 Species:Drosophila melanogaster

Alignment Length:228 Identity:80/229 (35%)
Similarity:87/229 (38%) Gaps:53/229 (23%)


  Fly   409 GISGVTANTPTGNVPSNGGGIAAGKAPGNPQA---------GGSGGIIGAGAPGGRKVSAGGIGS 464
            |..|.......|....:|||...|.|||.|.|         ||.||..|||...||..|.||.||
  Fly   271 GSGGGGGGAGGGGGYGSGGGSGRGGAPGGPGAPGGGGFGGQGGGGGYGGAGGGAGRGGSPGGPGS 335

  Fly   465 ---------GSAIGGVSGGSKAS-GNGGAIGSGSAIGGGATGSKASGFGFGSNIGGGVSGSKP-- 517
                     |.|.||..||.... |.|||.|:..:.|||..|.:..|.|||   |||..|..|  
  Fly   336 PGGGGFGGQGGAGGGYGGGGGGGRGGGGAPGAPGSPGGGGFGGQGGGGGFG---GGGGRGGAPGA 397

  Fly   518 ------SGFGSESKIGGPDSGSKALGFGS--------GSKIGGGITGT-KASGFGGEIGSGRGSA 567
                  .|:|.:...||...|....|.|.        ||..|||..|. ...||||  |.|||.|
  Fly   398 PGSPGGGGYGGQGGAGGGYGGGGGRGGGGAPGAPGAPGSPGGGGFGGQGGGGGFGG--GGGRGGA 460

  Fly   568 SSATGDLYKFKYILDYNGHEETGGRNGDKQGSY 600
            ..|.|.          .|....||:.|.  |.|
  Fly   461 PGAPGS----------PGGGGFGGQGGG--GGY 481

Known Domains:


GeneSequenceDomainRegion External IDIdentity
l(3)mbnNP_729143.2 Chitin_bind_4 31..77 CDD:278791
Chitin_bind_4 575..621 CDD:278791 6/27 (22%)
Cpr47EfNP_610660.2 Chitin_bind_4 149..204 CDD:278791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR10380
RoundUp 00.000 Not matched by this tool.
11.100

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