DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbn and Lcp1

DIOPT Version :10

Sequence 1:NP_729143.2 Gene:l(3)mbn / 38701 FlyBaseID:FBgn0002440 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_476619.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster


Alignment Length:87 Identity:20/87 - (22%)
Similarity:37/87 - (42%) Gaps:20/87 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   552 KASGFGGEIGSGRGSASSATGDLYKFKYILDYNGHEETGGRNGDKQGSYFAIGEDAVQRTIEYIA 616
            :|.||...:.:..|...:|:||.:                  |:..|::..|..:.....::|:|
  Fly    42 RADGFDSSLHTSNGIEQAASGDAH------------------GNIHGNFGWISPEGEHVEVKYVA 88

  Fly   617 NEFGFQPHVSWRKLDAKEALPE 638
            ||.|:||..:|  :.....:||
  Fly    89 NENGYQPSGAW--IPTPPPIPE 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbnNP_729143.2 Chitin_bind_4 575..621 CDD:459790 7/45 (16%)
Lcp1NP_476619.1 Chitin_bind_4 46..93 CDD:459790 12/64 (19%)

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