DRSC/TRiP Functional Genomics Resources

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Protein Alignment: l(3)mbn and Cpr12A

Sequence 1:NP_729143.2 Gene:l(3)mbn FlyBaseID:FBgn0002440 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_572896.1 Gene:Cpr12A FlyBaseID:FBgn0030494 Length:173 Species:Drosophila melanogaster

Alignment Length:71 Identity:17/72 (24%)
Similarity:31/72 (43%) Gaps:17/72 (24%)


  Fly    31 YKFGFTIDEQQHRAEKRDERG-----------IIMGEFGFITADGIYHVTVYATDEEG--KFRII 82
            |::.|.:|:    ...|.|||           :::|.:.:...||.|....|..|:.|  :.:.|
  Fly    46 YEYRFELDD----GTARYERGYFVKINDVKTLMVVGYYAYRMTDGRYITVFYNADQFGYRQNQSI 106

  Fly    83 SMKSYP 88
            :.:.||
  Fly   107 TPQEYP 112

Known Domains:


GeneSequenceDomainRegion External IDIdentity
l(3)mbnNP_729143.2 Chitin_bind_4 31..77 CDD:278791 13/57 (23%)
Chitin_bind_4 575..621 CDD:278791
Cpr12ANP_572896.1 Chitin_bind_4 46..100 CDD:278791 14/58 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR10380
RoundUp 00.000 Not matched by this tool.
11.100

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