DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: l(3)mbn and Cpr11B

Sequence 1:NP_729143.2 Gene:l(3)mbn FlyBaseID:FBgn0002440 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_572807.1 Gene:Cpr11B FlyBaseID:FBgn0030398 Length:197 Species:Drosophila melanogaster

Alignment Length:146 Identity:41/147 (28%)
Similarity:57/147 (39%) Gaps:15/147 (10%)


  Fly   502 FGFGSNIGGGVSGSK--PSGFGSESKIGGPDSGSKALGFGSGSKIGGGITGTKASGFGGEIGSGR 564
            |||.|.|..|....:  |:...|:....|. ||......|:|...|||.:..:..  ..:|...|
  Fly    13 FGFSSAILAGRLSQRYLPTPQASQLHYHGV-SGQGQARPGAGHSFGGGSSYQRQQ--QPQIPIVR 74

  Fly   565 GSASSATGDLYKFKYILDYNGH-EETGGRNG-------DKQGSYFAIGEDAVQRTIEYIANEFGF 621
            ...:|.....|.|.:......| :|||...|       ..||||...|:|..|.|:.|.|::.||
  Fly    75 SDYNSDANGNYNFGFDTGNGIHRDETGEFRGGWPHGSLGVQGSYSYTGDDGKQYTVNYTADKNGF 139

  Fly   622 QPHVSWRKLDAKEALP 637
              |.....|....::|
  Fly   140 --HAEGAHLPVSPSVP 153

Known Domains:


GeneSequenceDomainRegion External IDIdentity
l(3)mbnNP_729143.2 Chitin_bind_4 31..77 CDD:278791
Chitin_bind_4 575..621 CDD:278791 18/54 (33%)
Cpr11BNP_572807.1 Chitin_bind_4 85..139 CDD:278791 18/54 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR10380
RoundUp 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.