DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(3)mbn and Cpr11B

DIOPT Version :10

Sequence 1:NP_729143.2 Gene:l(3)mbn / 38701 FlyBaseID:FBgn0002440 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_572807.1 Gene:Cpr11B / 32203 FlyBaseID:FBgn0030398 Length:197 Species:Drosophila melanogaster


Alignment Length:146 Identity:41/146 - (28%)
Similarity:57/146 - (39%) Gaps:15/146 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   502 FGFGSNIGGGVSGSK--PSGFGSESKIGGPDSGSKALGFGSGSKIGGGITGTKASGFGGEIGSGR 564
            |||.|.|..|....:  |:...|:....|. ||......|:|...|||.:..:..  ..:|...|
  Fly    13 FGFSSAILAGRLSQRYLPTPQASQLHYHGV-SGQGQARPGAGHSFGGGSSYQRQQ--QPQIPIVR 74

  Fly   565 GSASSATGDLYKFKYILDYNGH-EETGGRNG-------DKQGSYFAIGEDAVQRTIEYIANEFGF 621
            ...:|.....|.|.:......| :|||...|       ..||||...|:|..|.|:.|.|::.||
  Fly    75 SDYNSDANGNYNFGFDTGNGIHRDETGEFRGGWPHGSLGVQGSYSYTGDDGKQYTVNYTADKNGF 139

  Fly   622 QPHVSWRKLDAKEALP 637
              |.....|....::|
  Fly   140 --HAEGAHLPVSPSVP 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbnNP_729143.2 Chitin_bind_4 575..621 CDD:459790 17/53 (32%)
Cpr11BNP_572807.1 Chitin_bind_4 85..139 CDD:459790 17/53 (32%)

Return to query results.
Submit another query.