DRSC/TRiP Functional Genomics Resources

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Protein Alignment loj and Tmed7

DIOPT Version :8

Sequence 1:NP_648027.3 Gene:loj / 38698 FlyBaseID:FBgn0061492 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_079974.1 Gene:Tmed7 / 66676 MGIID:1913926 Length:224 Species:Mus musculus

Alignment Length:196 Identity:42/197 (21%)
Similarity:84/197 (43%) Gaps:4/197 (2%)


  Fly    42 PAVAMDYKVHIDAGKEDCYHQYVKAGATFYVSFSVVRGGDGMAGFAVRNPAGEVVKPYQWQATAD 106
            |:...:....:....:.|:::.:..|....:.|.|:.||.......:.:|.|:|:.....:....
Mouse    31 PSGGSEITFELPDNAKQCFYEDITQGTKCTLEFQVITGGHYDVDCRLEDPDGKVLYKEMKKQYDS 95

  Fly   107 YTDQVSPGGYYSVCIDNQFSRFAGKLVNIYITVVKYDAWDKYAKEIEQLQLNMQNFTATVGTVER 171
            :|...|..|.|..|..|:||.|..|.|.....|.:..........:..|   .|..:|.| ::..
Mouse    96 FTFTASRNGTYKFCFSNEFSTFTHKTVYFDFQVGEDPPLFPSENRVSAL---TQMESACV-SIHE 156

  Fly   172 NINDMMGYQAHSRHRESRDYALLLDNNAYIQTFSISQIVVILITCSVQVFFVRKLFEVKSSSKSR 236
            .:..::.||.|.|.||::..:...|.|..:..:|:.:.:::|:....|||.::..|..|.::.:|
Mouse   157 ALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSVGQVFLLKSFFSDKRTTTTR 221

  Fly   237 I 237
            :
Mouse   222 V 222

Known Domains:


GeneSequenceDomainRegion External IDIdentity
lojNP_648027.3 EMP24_GP25L 47..228 CDD:279450 39/181 (22%)
Tmed7NP_079974.1 EMP24_GP25L 36..213 CDD:307313 39/181 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG1693
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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