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Protein Alignment loj and TMED1

DIOPT Version :9

Sequence 1:	NP_648027.3	Gene:	loj / 38698	FlyBaseID:	FBgn0061492	Length:	237	Species:	Drosophila melanogaster
Sequence 2:	NP_006849.1	Gene:	TMED1 / 11018	HGNCID:	17291	Length:	227	Species:	Homo sapiens

Alignment Length:	188	Identity:	43/188 - (22%)
Similarity:	88/188 - (46%)	Gaps:	12/188 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly    52 IDAGKEDCYHQYVKAGATFYVSFSVVRGGDGM-AGFAVRNPAGEVVKPYQWQATADYTDQVSPGG 115
            :.||::.|::|...|.|:....:.|: ||.|: ..|.:.:|.|.::.....:|...:|.:.:..|
Human    38 LPAGRKQCFYQSAPANASLETEYQVI-GGAGLDVDFTLESPQGVLLVSESRKADGVHTVEPTEAG 101

  Fly   116 YYSVCIDNQFSRFAGKLVNIYITVV--------KYDAWDKYAKEIEQLQLNMQNFTATVGTVERN 172
            .|.:|.||.||..:.|||  :..::        :.:.|.:..:..|.|.:.|::...::.|:...
Human   102 DYKLCFDNSFSTISEKLV--FFELIFDSLQDDEEVEGWAEAVEPEEMLDVKMEDIKESIETMRTR 164

  Fly   173 INDMMGYQAHSRHRESRDYALLLDNNAYIQTFSISQIVVILITCSVQVFFVRKLFEVK 230
            :...:......|..|:||..|...|...:..:|...:.|:|:...:||..:::.|:.|
Human   165 LERSIQMLTLLRAFEARDRNLQEGNLERVNFWSAVNVAVLLLVAVLQVCTLKRFFQDK 222

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.