DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG10483 and VTC1

DIOPT Version :9

Sequence 1:	NP_648000.1	Gene:	CG10483 / 38666	FlyBaseID:	FBgn0035649	Length:	671	Species:	Drosophila melanogaster
Sequence 2:	NP_010995.1	Gene:	VTC1 / 856803	SGDID:	S000000874	Length:	129	Species:	Saccharomyces cerevisiae

Alignment Length:	58	Identity:	17/58 - (29%)
Similarity:	21/58 - (36%)	Gaps:	15/58 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly   228 KVGLFSGAFVVLFITVVIAAMFYGF-GENWRAGMRMFR---------APFLIIECLFL 275
            |:|..|..   ||..|.:..|.|.. ..:|||.....|         .|.|:  |.||
Yeast    56 KIGRVSAG---LFTFVAMGTMIYALVTYHWRAAAIRRRGSGPYDDRLGPTLL--CFFL 108

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG10483	NP_648000.1	SPX_XPR1_like	2..159	CDD:269898
		SPX	3..162	CDD:281146
		EXS	260..600	CDD:281164	6/25 (24%)
VTC1	NP_010995.1	VTC1	1..124	CDD:227589	17/58 (29%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C157343550
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930