DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PXo and VTC1

DIOPT Version :10

Sequence 1:NP_648000.1 Gene:PXo / 38666 FlyBaseID:FBgn0035649 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_010995.1 Gene:VTC1 / 856803 SGDID:S000000874 Length:129 Species:Saccharomyces cerevisiae


Alignment Length:58 Identity:17/58 - (29%)
Similarity:21/58 - (36%) Gaps:15/58 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 KVGLFSGAFVVLFITVVIAAMFYGF-GENWRAGMRMFR---------APFLIIECLFL 275
            |:|..|..   ||..|.:..|.|.. ..:|||.....|         .|.|:  |.||
Yeast    56 KIGRVSAG---LFTFVAMGTMIYALVTYHWRAAAIRRRGSGPYDDRLGPTLL--CFFL 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PXoNP_648000.1 SPX_XPR1_like 2..159 CDD:269898
EXS 260..600 CDD:460816 6/25 (24%)
VTC1NP_010995.1 VTC1 1..124 CDD:227589 17/58 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.