DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG10483 and VTC3

Sequence 1:NP_648000.1 Gene:CG10483 FlyBaseID:FBgn0035649 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_015306.1 Gene:VTC3 SGDID:S000005940 Length:835 Species:Saccharomyces cerevisiae

Alignment Length:168 Identity:49/169 (29%)
Similarity:68/169 (40%) Gaps:42/169 (25%)


  Fly     1 MKFAEHLTAHITPEWRKQYINYEEMKAMLYAAIEQSPSAELVEREMVTRYFAKFDEEFFHYCDKE 65
            |.|...|...:.|.|:..||:||.:|.:|..::...      .|..|..:..:.:.:|....|||
Yeast     1 MLFGIKLANDVYPPWKDSYIDYERLKKLLKESVIHD------GRSSVDSWSERNESDFVEALDKE 59

  Fly    66 LAKINTFYSEKMAEATRKYGSLRSELTEALEMGHPKKLPAWKRRTPLGKKNVPARKIQDLKLAFS 130
            |.|:.||...|.....||...| .|.|::                        |.|||.:.   |
Yeast    60 LEKVYTFQISKYNAVLRKLDDL-EENTKS------------------------AEKIQKIN---S 96

  Fly   131 EFYLGLI--------LLQNYQNLNFTGFRKILKKHDKL 160
            |.:...:        .|.|:..||||||.||:||||||
Yeast    97 EQFKNTLEECLDEAQRLDNFDRLNFTGFIKIVKKHDKL 134

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG10483NP_648000.1 SPX_XPR1_like 2..159 CDD:269898 46/165 (28%)
SPX 3..162 CDD:281146 48/167 (29%)
EXS 260..600 CDD:281164
VTC3NP_015306.1 SPX 1..561 CDD:328757 49/169 (29%)
VTC1 673..803 CDD:227589
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C116276669
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 0.569298 Normalized mean entropy S1995
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.880

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