DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG10483 and VTC2

Sequence 1:NP_648000.1 Gene:CG10483 FlyBaseID:FBgn0035649 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_116651.1 Gene:VTC2 SGDID:S000001890 Length:828 Species:Saccharomyces cerevisiae

Alignment Length:164 Identity:49/165 (30%)
Similarity:72/165 (44%) Gaps:33/165 (20%)


  Fly     1 MKFAEHLTAHITPEWRKQYINYEEMKAMLYAAIEQSPSAELVEREMVTRYFAKFDEEFFHYCDKE 65
            |.|...|...:.|.|:..|||||.:|..|     :..|.:....:...|:....:.:|....|||
Yeast     1 MLFGVKLANEVYPPWKGSYINYEGLKKFL-----KEDSVKDGSNDKKARWDDSDESKFVEELDKE 60

  Fly    66 LAKINTFYSEKMAEATRKYGSLRSELTEALEMGHPKKLPAWKRRTPLGKKNVPA----RKIQDLK 126
            |.|:..|       ..:||.:|...|:      |.:|    :..|....|.:.|    |.:::|.
Yeast    61 LEKVYGF-------QLKKYNNLMERLS------HLEK----QTDTEAAIKALDADAFQRVLEELL 108

  Fly   127 LAFSEFYLGLILLQNYQNLNFTGFRKILKKHDKL 160
            ...:|       |.|::.||||||.||:||||||
Yeast   109 SESTE-------LDNFKRLNFTGFAKIVKKHDKL 135

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG10483NP_648000.1 SPX_XPR1_like 2..159 CDD:269898 46/161 (29%)
SPX 3..162 CDD:281146 48/163 (29%)
EXS 260..600 CDD:281164
VTC2NP_116651.1 COG5036 1..555 CDD:227369 49/165 (30%)
SPX_VTC2_like 2..134 CDD:269901 46/161 (29%)
PolyPPase_VTC2-3_like 197..547 CDD:143630
VTC1 662..791 CDD:227589
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C116276675
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 0.569298 Normalized mean entropy S1995
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.880

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