DRSC/TRiP Functional Genomics Resources

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Protein Alignment PXo and SHB1

DIOPT Version :10

Sequence 1:NP_648000.1 Gene:PXo / 38666 FlyBaseID:FBgn0035649 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_194265.2 Gene:SHB1 / 828638 AraportID:AT4G25350 Length:745 Species:Arabidopsis thaliana


Alignment Length:757 Identity:187/757 - (24%)
Similarity:317/757 - (41%) Gaps:172/757 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFAEHLTAHITPEWRKQYINYEEMKAML---YAAIEQS-----PSAELVEREMVTRY------- 50
            |:|.:...:.:.|||::.||:|..:|.:|   .|:..:|     .|.....|.:..||       
plant     1 MRFGKEFVSQMIPEWQEAYIDYAYLKTILQDIQASRNRSDSNNQSSTPSFARNLTRRYNRDALVS 65

  Fly    51 -------------------------FAK-------FDEEFFHYCDKELAKINTFY---------- 73
                                     |.|       |:..||...|:|..|:|.||          
plant    66 ENHDIVVNTVTRLEEGLETAAYETTFLKAGEAGGDFEVTFFRTLDREFNKVNNFYRLKVETARTE 130

  Fly    74 --------------SEKMAEATRKYGSLRSELTE-----ALEMGHPKK----------------- 102
                          ..|:.:..:|..|:...::|     |.|:|...|                 
plant   131 ALALNKQMDALIAFRHKVMDQNQKNPSVFDSVSEDINGSASEVGSSSKCTEHNVALADLMRNEDT 195

  Fly   103 ----------LPAWKRRTPLG--KKNVPARKIQDLK--------------LAFSEFYLGLILLQN 141
                      :...:..|||.  |..:...|..:||              :||.|||..|..|:|
plant   196 SNESILERIRMNKTREITPLSAIKTILKVHKQDELKFTRDNLKEVEKRLQVAFIEFYQKLRHLKN 260

  Fly   142 YQNLNFTGFRKILKKHDKLLSVDYGARWRTDHVEAAHFYTNKDIDRLIQETEQAVTQDIEGGDRQ 206
            |..||.:...||:||:||:...: .|:...:.|:.:...:::::.:|:.:.|....:.....:|:
plant   261 YSFLNASAVSKIMKKYDKIAKRN-AAKLYMEMVDKSFLSSSEEVHKLLLKVESIFIEHFSNSNRR 324

  Fly   207 RAMKRLRVPPLGEQQSPWTTFKVGLFSGAFVVLFIT---VVIAAMFYGFGENWRAGMR------- 261
            ..|..|| |.:.:::. ..||..|.|.|..:.|.:.   ::.|....|     ..|.|       
plant   325 EGMSHLR-PKINKERH-LITFSTGFFFGCGISLIVALGLIIHARNIMG-----TPGQRTYMETMF 382

  Fly   262 -MFRAPFLIIECLFLWGVNVYGWRSSGVNHVLIFELDPRNHLSEQNIMEVASVFGVIWACCVL-- 323
             ::|....::..:.::..|:|.||...||:..||.......|..::::.::...|.:..|.||  
plant   383 PLYRFFGFVVLHMDVYAANIYFWRRYRVNYSFIFGFKQGTELGYRHVLLLSFGLGTLSLCAVLLN 447

  Fly   324 ----------SYIFCDPLGIPQYAAPLCLYTLMAAFLLNPTKTFHHEARFWAIRILIRVIMAPFC 378
                      .|.....|      .||.|..|:...:|.|....:..:||:.:.:|.|.|.|||.
plant   448 LDMEMDAQTKDYRLVTEL------IPLFLLVLVIIIVLCPFNILYRSSRFFFLSVLFRCIAAPFY 506

  Fly   379 FVNFADFWLADQLNSMVPAFLDIPFLICFFGRSPTWHKAGKAASHCVEYVSLLHPIVAIMPAYFR 443
            .|:..||:|.|||.|.|.|...:.|.||::|.....::.....:..:.: ...:.|||::|.:.|
plant   507 AVHLPDFFLGDQLTSQVQALRSLEFYICYYGFGDFRYRRRNTCTSNIGF-RTFYFIVAVIPYWLR 570

  Fly   444 FAQCIRRYRDTKESFPHLVNAAKYATSFFVVIFAHKYHTTTDTYPLSKENPWFYCWITAAIFS-- 506
            |.|||||..:.:: ..|..|..||    .:.|.|....|   .|.|::.:.|.   |||.:||  
plant   571 FLQCIRRMVEDRD-LSHGYNGIKY----LLTIVAASLRT---AYTLNRGSNWN---ITAWVFSGV 624

  Fly   507 -SCYAYTWDIKMDWGLFDSKAGDNRFLREEIVYSSTWFYYFGIIEDLILRFSWTLSMSLIEAGYI 570
             :.|...|||.:||||. .:...|.|||::::......||..::.:::||..|..::..::..::
plant   625 ATFYGTYWDIVLDWGLL-QRGCKNSFLRDKLLVPHKTVYYAAMVLNVLLRLVWLQTVLDLKFSFL 688

  Fly   571 EGDVMMTILSPLEVFRRFIWNYFRLENEHLNNVGKFRAVRDI 612
            ..:.|:.:::.||:.||.|||:||||||||||||::||.:.:
plant   689 HRETMVALMACLEIIRRGIWNFFRLENEHLNNVGRYRAFKTV 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PXoNP_648000.1 SPX_XPR1_like 2..159 CDD:269898 56/275 (20%)
EXS 260..600 CDD:460816 102/362 (28%)
SHB1NP_194265.2 SPX 1..292 CDD:460807 60/291 (21%)
EXS 381..718 CDD:460816 101/355 (28%)

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