DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PXo and erd101

DIOPT Version :9

Sequence 1:NP_648000.1 Gene:PXo / 38666 FlyBaseID:FBgn0035649 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_593018.1 Gene:erd101 / 2542527 PomBaseID:SPAC1D4.05C Length:387 Species:Schizosaccharomyces pombe


Alignment Length:396 Identity:86/396 - (21%)
Similarity:152/396 - (38%) Gaps:92/396 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 FRAPFLIIECLFLWGV----------------NVYGWRSSGVNHVLIFELDPRNHLSEQN----- 306
            ||...|:|...:||.|                |..|..:|...|:|...|..|:...|:|     
pombe    18 FRIGLLVIVGTWLWSVCYHLIYILNRYQPISPNPRGSLNSKWYHLLQIPLSNRHTDLEENTEFKA 82

  Fly   307 --IMEV--------ASVFGVIWACCVLSYI---FCDPLGIPQYAAPLC-LYTLMAAFLL--NPTK 355
              :..|        |::..:.||...:.::   ..|..|:  |:.|:. |..::.||:|  .|..
pombe    83 NLVSPVDFHAGYCFAAILSISWATGFILFLKKTQGDIGGL--YSHPIYPLLWVITAFILIVFPFP 145

  Fly   356 TFHHEARFWAIRILIRVIMAPFCFVN------FADFWLADQLNSMVPAFLDIPFLICFFGRSPTW 414
            ..:..::....:.:|||    |.|..      :.||.:::...|...|..|.....|..      
pombe   146 WRYRSSQRGLRKSIIRV----FLFFQADFRSPYKDFIVSEIFTSYAKALGDFYIFGCVL------ 200

  Fly   415 HKAGKAASHCVEYV---------SLLHPIVAIMPAYFRFAQCI-----RRYRDTKESFP-HLVNA 464
                  ..|..::.         :...|:....|......||:     ||    |.:|. :|::|
pombe   201 ------QGHISKFTLRPDLKCDGTFFVPLAMAYPFIVAILQCLHYGLSRR----KHTFKINLLSA 255

  Fly   465 AKYATSFFVVIFAHKYHTTTDTYPLSKENPW-FYCWITAAIFSSCYAYTWDIKMDWGL---FDSK 525
            .|:||:..|:..:...|.....:.|:..:.: |:.||.:|:.||.|.:.||:.:||.:   |...
pombe   256 LKHATALPVIYLSAIIHAKQTKFTLTSGHGYLFWLWILSALLSSAYTFLWDVFIDWRIRFPFHKS 320

  Fly   526 AGDNRFLREEIVYSSTWFYYFGIIEDLILRFSWTLSMSLIEAGYIEGDVMMTILSPLEVFRRFIW 590
            ....||        ..:.|..|...:.|||.:|::.:......:.|.::.:.....||:.|||:|
pombe   321 INHKRF--------PMFIYAIGCFINFILRVTWSMKLHPRLHQFHEYEMGIFSFEMLEILRRFLW 377

  Fly   591 NYFRLE 596
            .:|.|:
pombe   378 LFFHLD 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PXoNP_648000.1 SPX_XPR1_like 2..159 CDD:269898
EXS 260..600 CDD:460816 86/396 (22%)
erd101NP_593018.1 COG5409 2..387 CDD:227696 86/396 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.