DRSC/TRiP Functional Genomics Resources

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Protein Alignment PolE2 and DNApol-epsilon58

DIOPT Version :10

Sequence 1:NP_647995.1 Gene:PolE2 / 38661 FlyBaseID:FBgn0035644 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_315206.4 Gene:DNApol-epsilon58 / 1275918 VectorBaseID:AGAMI1_012200 Length:521 Species:Anopheles gambiae


Alignment Length:516 Identity:288/516 - (55%)
Similarity:364/516 - (70%) Gaps:2/516 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LRKRITNTFKLCGFLIRSENSSYLAEQLLPFDAAERDKWLTVITENLQSQKLLTPHVERAALEKA 72
            |:.:|.:.|.|.||.||||.|::||:||.|.|.|||.||:|.:..::|.|.|..|.:|:..:|.|
Mosquito     7 LKSQIVSRFSLGGFQIRSEASTFLAQQLQPLDDAERKKWITNVANHVQGQCLNLPVIEKQHIELA 71

  Fly    73 INELNRVGLDEGETVFALIDAFTVPRFRYNQRIKKFELDTQPRQLLTAPRMKSDYMQQRYAMLLQ 137
            |.|.|..|||:.||:|.:|.||.||.|.|....|||..||..|.||..|..||.|:::||.:|.|
Mosquito    72 IKEANNTGLDDTETIFRVISAFEVPSFVYCAEKKKFLPDTNKRSLLATPDGKSSYIRERYWLLWQ 136

  Fly   138 KTLRHDLFAPAVIQDGVGAEAQAKKFKLQFAENLLATSAMKEAVVLGLLTQLKEGKFYVEDPTGC 202
            ||.||:.|:... ..|:.|.....|..|:..||:|:||.|.:.|:|||||||.||::|:|||||.
Mosquito   137 KTSRHETFSQRT-TPGMEAPGNRNKLSLRKVENILSTSKMNDVVLLGLLTQLTEGRYYLEDPTGS 200

  Fly   203 VQLDLTGARFHAGFFCEGCFVLAEGNYNNGVLKVDGLGFPPAEPANSSRAFFGTANTWGGESAKL 267
            :.:|::.|.:..|.||||||:||.|.|.:|||||:.:|||..|.|.:|||||||.|:|||.|..|
Mosquito   201 IPIDISTATYSPGLFCEGCFLLAYGKYRDGVLKVEEIGFPMPELATNSRAFFGTVNSWGGPSKTL 265

  Fly   268 LKYSAGLQELERTNTETTIVFLSDVRLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHH 332
            ||||..|.:||:.|.|.::|||||..||.|:|||||.||..|||..||.||||||||..|..|.:
Mosquito   266 LKYSRNLNDLEKANVEHSLVFLSDCWLDNPIVMEKLEQLLRGYDDFPPVAIVLMGPFARSIENVY 330

  Fly   333 ELRHHLDALGGLAAGCEQLKKQTDLILVPSSEDPTAPNILPRAPIPECLAAGLLKAWPRTQLATN 397
            .|:.|...||.:.:.||:||.||||::|||.:||.|.|||||.|:||.||..|.|.:|||.|.||
Mosquito   331 TLKGHFIKLGEILSSCEKLKSQTDLVIVPSIDDPAAANILPRPPVPEALAGELKKRFPRTILTTN 395

  Fly   398 PCRLQYCTQQIVVCRLDLMAKFCRNTLHFPEDTSQIEQHFARTIVCQGHLVPIHPIAMPVHWDYD 462
            |||||||||||||||.||:.|.||||:|||:: ..:|:||||||:.|..|.|:.|||.|.||:||
Mosquito   396 PCRLQYCTQQIVVCRADLVTKLCRNTIHFPKE-GLLEEHFARTIINQNTLAPLTPIAFPTHWNYD 459

  Fly   463 PALWLYPLPDLIVMGDSCQSFSSSQHGCTVLNTGSFVKSKFAFKVYIPATRTIEDSEIPDE 523
            .||.|||||||||:||.||.|.:::..|||:|.|||.|||:|||||.|::||:|||:||||
Mosquito   460 AALSLYPLPDLIVIGDPCQGFHTTEQECTVMNVGSFPKSKYAFKVYYPSSRTVEDSQIPDE 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PolE2NP_647995.1 Dpoe2NT 7..76 CDD:463494 31/67 (46%)
DNA_pol_E_B 286..483 CDD:461142 124/196 (63%)
DNApol-epsilon58XP_315206.4 None

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