DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18586 and AT1G21530

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001077573.1 Gene:AT1G21530 / 838754 AraportID:AT1G21530 Length:549 Species:Arabidopsis thaliana


Alignment Length:543 Identity:125/543 - (23%)
Similarity:210/543 - (38%) Gaps:120/543 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PSLFSPNLSIGEI-----IFGDMVNNPKLIAQISITEDIVLTREDLHMNAMRVASYM--RNMGLG 87
            ||..:|...:|.:     ::||.   |.::.    |.:.|.|..:.|...:|:||.:  .::|:.
plant     8 PSNSTPLTVLGFLDRAASVYGDC---PSILH----TANTVHTWSETHNRCLRIASALTSSSIGIK 65

  Fly    88 QTDIVGVMGRHTTHQSAVAYACFFNGTPLHALHNAYEEACIAKLFGITKPRLIFCDGDEYEKVKS 152
            |..:|.|:|.:......:.:|...:|..|:.::...:...::.|...::.||:|.|......|..
plant    66 QGQVVSVVGPNVPSVYELQFAVPMSGAILNNINPRLDAHALSVLLRHSESRLVFVDHRSISLVLE 130

  Fly   153 ATKDLQVTIVTMRNHP----------RGSVRIQDVLTT--PVMQ-------------NFQPLRLK 192
            |     |::.|....|          ..|....|.|.|  .:|:             .:||:.|.
plant   131 A-----VSLFTQHEKPHLVLLDDDQENDSSSASDFLDTYEEIMERGNSRFKWIRPQTEWQPMVLN 190

  Fly   193 DGIDHTLAILSSSGTSGFPKAVTISNSHKIIVDYMAINNSNIQYTSSTLDW-------------- 243
                      .:|||:..||.|.:  ||:.|  :|..       .||.|||              
plant   191 ----------YTSGTTSSPKGVVL--SHRAI--FMLT-------VSSLLDWSVPNRPVYLWTLPM 234

  Fly   244 --CSGLSMAITSGVFSTTSIIADCDFDPGLFCRAIGKYRISMVLLSSSYLAIFANCPEFESADLS 306
              .:|......:.....|:|.......|.:: ..|.|:.::.:..:...|.:..|.|  .|..|.
plant   235 FHANGWGYTWGTAAVGATNICTRRVDAPTIY-NLIDKHNVTHMCAAPMVLNMLINYP--LSTPLK 296

  Fly   307 SLNYVIFGGSSCSLEVQRKVRS---RLSHDCLNFCYGLTELNSAGSV----------NLNFDEKP 358
            :...|:..|:.....:..:..|   .:||.     |||||  ::|.|          :|:..|:.
plant   297 NPVQVMTSGAPPPATIISRAESLGFNVSHS-----YGLTE--TSGPVVSCAWKPKWDHLDPLERA 354

  Fly   359 NSVGR-AIRGIKIKVIDEQGEAQEPNV------VGEICFHNSQKWAGYYKNPDETRQIQDSENWI 416
            ....| .:|.:....:|.:......:|      ||||.|..|....||||:|..|......:.|.
plant   355 RLKSRQGVRTLGFTEVDVRDRKTGKSVKHDGVSVGEIVFRGSSVMLGYYKDPQGTAACMREDGWF 419

  Fly   417 HTGDLGYVDKDGYLFVIDRLKDMLKYQNIMYYPSEIENVIAEMPNVLEACVFGIWDPVNGDEAAA 481
            ::||:|.:.|||||.:.||.||::.........:|||.|:...|.|.||.|....|.:.|:...|
plant   420 YSGDIGVIHKDGYLEIKDRSKDVIICGGENISSAEIETVLYTNPVVKEAAVVAKPDKMWGETPCA 484

  Fly   482 SLVKK---------PGTQLEAQD 495
            .:..|         |.|:.|.::
plant   485 FVSLKCDNNGDGSVPVTEREIRE 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 123/538 (23%)
AFD_class_I 55..530 CDD:302604 118/513 (23%)
AT1G21530NP_001077573.1 PRK08162 4..549 CDD:236169 125/543 (23%)
ttLC_FACS_AEE21_like 12..543 CDD:213326 123/539 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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