DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18586 and AcCoAS

DIOPT Version :9

Sequence 1:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001014599.2 Gene:AcCoAS / 40348 FlyBaseID:FBgn0012034 Length:670 Species:Drosophila melanogaster


Alignment Length:562 Identity:122/562 - (21%)
Similarity:200/562 - (35%) Gaps:126/562 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LTREDLHMNAMRVASYMRNMGLGQTDIVGVMGRHTTHQSAVAYAC----------FFNGTPLHAL 119
            ||...|.....|.|:.:::.|:.:.|.|.:.............||          |...:|....
  Fly   116 LTYRKLLEEVCRFANVLKDHGIRKGDRVSIYMPMILELPIAMLACARIGAVHSIVFAGFSPDSLA 180

  Fly   120 HNAYEEACIAKLFGIT--------KPRLI--FCDGDEYEKVKSATKDLQVTIVTMRNHPRGSVRI 174
            ...::  |.|||. ||        ||..:  .|| ...|||:.....::..||.  :|.:.....
  Fly   181 ERMFD--CKAKLL-ITADGAWRGEKPLYLKALCD-TALEKVEEMGHSVEKCIVV--SHLKRVTPC 239

  Fly   175 Q--------------DVLTTPVMQNFQPLRLKDGID--HTLAILSSSGTSGFPKAVT-------- 215
            |              |......|::.:|....:.:|  ..|.:|.:||::|.||.|.        
  Fly   240 QPDHVEEEIPWTDDRDYWWHEEMEDKEPACYPEWMDAEDPLFMLYTSGSTGKPKGVLHTTAGYLL 304

  Fly   216 -ISNSHKIIVDYMAINNSNIQYTSSTLDWCSG--------LSMAITSGVFSTTSIIADCDFDPG- 270
             .:.:.||:.||   ...:|.:.:..:.|.:|        |:...||.:|..|      .|.|| 
  Fly   305 YAATTFKIVFDY---KPGDIYWCTGDVGWITGHTYVVYGPLANGATSVIFEGT------PFFPGN 360

  Fly   271 -LFCRAIGKYRISMVLLSSS---YLAIFANCPEFESADLSSLN-----------------YVIFG 314
             .:...|.||:::....:.:   .|..|...|..:. :||.|.                 |...|
  Fly   361 DRYWSVIDKYKVTQFYTAPTAIRALMKFGEGPVLKH-NLSGLKVLGSVGEPINPEAWLWYYKYIG 424

  Fly   315 GSSCSLEVQRKVRSRLSHDCLNFCYGLTELNSAGSVNLNFDEKPNSVGRAIRGIKIKVIDEQGEA 379
            ...||: |....::......:....|.|.:            ||.|......|:|..::||.|..
  Fly   425 KEQCSI-VDTFWQTETGGHVITPLPGATPM------------KPGSASFPFFGVKPTLLDECGIE 476

  Fly   380 QEPNVVGEICFHNSQKWAG----YYKNPD--ETRQIQDSENWIHTGDLGYVDKDGYLFVIDRLKD 438
            .:....|.:.|  ||.|.|    .|.|.:  |.........:..|||....|.||||::..|:.|
  Fly   477 IKGEGEGYLVF--SQPWPGMMRTLYNNHERFEDTYFSKFPGYYCTGDGARRDADGYLWITGRVDD 539

  Fly   439 MLKYQNIMYYPSEIENVIAEMPNVLEACVFGIWDPVNGDEAAASLVKKPGTQLEAQ---DVVEYV 500
            ||.....:...:|:|:|:.|.|.|.|:.|.....||.|:.....:........:.:   |:.:.|
  Fly   540 MLNVSGHLMSTAEVESVLTEHPRVAESAVVSRPHPVKGECLYCFITPNENEVFDQKLISDLKKMV 604

  Fly   501 RKRITAKFKQLNGGALIVDQIVRS--GNRKTNRSAVKEHFLK 540
            |:||         |...:..::::  |..||....:....|:
  Fly   605 RERI---------GPFAMPDVIQNAPGLPKTRSGKIMRRVLR 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18586NP_647993.2 CaiC 35..541 CDD:223395 122/562 (22%)
AFD_class_I 55..530 CDD:302604 120/550 (22%)
AcCoASNP_001014599.2 PRK00174 7..665 CDD:234677 122/562 (22%)
ACS 30..654 CDD:213313 122/562 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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