DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and Usp17la

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_031913.1 Gene:Usp17la / 13531 MGIID:107699 Length:526 Species:Mus musculus


Alignment Length:583 Identity:156/583 - (26%)
Similarity:243/583 - (41%) Gaps:132/583 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 ENIRIGWKQSERKWQ----VGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEP 215
            |.:.:..|.| ..|:    .|.|:.|.||:||||:.||.|.|.|.||::::| |.|...|...| 
Mouse    31 EELTVNGKHS-LSWESPQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLS-QEHSQTCCSPE- 92

  Fly   216 GSGCIICAMTKTLLATQSNQSAVRPFLIYSKLKQICK--HMVVG-----RQEDAHEFLRFLVEAM 273
              ||.:|||  ..|.|||        |::|....:.|  |::..     :||||||||.|.:|.|
Mouse    93 --GCKLCAM--EALVTQS--------LLHSHSGDVMKPSHILTSAFHKHQQEDAHEFLMFTLETM 145

  Fly   274 ERAYLMRFRNYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLE 338
            ..:.|...|..|...:   :::|:..||||:.||:::||.|...|.|:..|.|:.|||..|.|::
Mouse   146 HESCLQVHRQSKPTSE---DSSPIHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIPLDISSAQSVK 207

  Fly   339 DA-FEGHFSRERLEDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFS-MIGNKLTKQISFKS 401
            .| ::...|.|...|..|.|..|::|:.|:|...:..||..|.:.|.||| ..||||.:::|:..
Mouse   208 QALWDTEKSEELCGDNAYYCGKCRQKMPASKTLHVHIAPKVLMVVLNRFSAFTGNKLDRKVSYPE 272

  Fly   402 RIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHS 466
            .:||..|.:.....   ||.|.|.:::.|.||:.|.|||........|.:|..||:.|....:.|
Mouse   273 FLDLKPYLSEPTGG---PLPYALYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTS 334

  Fly   467 VCNTNAYIMFF--ELDLSQAASPAANRPNGVRLTNGHSTTPVPAATVSSPSPTRFIGPQLPAGGA 529
            |.|.|||::|:  :.:|.|                                    :...:|.|..
Mouse   335 VLNENAYVLFYVQQANLKQ------------------------------------VSIDMPEGRI 363

  Fly   530 NGYTNGNAQKTAIQFKQQNQQSP---------QN-------GLQLGTGKFQDTAKPPLVGAHAKG 578
            |...:...|....:.|:..::||         :|       ...||.||......      |.| 
Mouse   364 NEVLDPEYQLKKSRRKKHKKKSPFTEDLGEPCENRDKRAIKETSLGKGKVLQEVN------HKK- 421

  Fly   579 EATSAPTANGNKSSSPSSNSSSNHKSINQQQYLPISSDDEDIEDEMKPRPTTAQLPSMPNMTEN- 642
                |...:||....|   ...||:...|      :..:.::|.::   |..|.:...|..|.| 
Mouse   422 ----AGQKHGNTKLMP---QKQNHQKAGQ------NLRNTEVELDL---PADAIVIHQPRSTANW 470

  Fly   643 -------HTEPKAKSPVKIQVKTPVKTPLKSLVPYESASEEEEAPLPNPRKRPSGEDSSESDQ 698
                   ..:|...:...:..:.||.|       ::...:|      ..|:...|::.::..|
Mouse   471 GRDSPDKENQPLHNADRLLTSQGPVNT-------WQLCRQE------GRRRSKKGQNKNKQGQ 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 114/314 (36%)
Usp17laNP_031913.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Peptidase_C19E 50..346 CDD:239126 115/315 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 374..394 3/19 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 465..494 3/28 (11%)
Blue background indicates that the domain is not in the aligned region.

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