DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp47 and usp24

DIOPT Version :10

Sequence 1:NP_523937.2 Gene:Usp47 / 38644 FlyBaseID:FBgn0016756 Length:1556 Species:Drosophila melanogaster
Sequence 2:XP_005170208.1 Gene:usp24 / 325631 ZFINID:ZDB-GENE-030131-4356 Length:2621 Species:Danio rerio


Alignment Length:772 Identity:184/772 - (23%)
Similarity:302/772 - (39%) Gaps:191/772 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 CPELSTEINSKNTSSESPVAKKT---AKVTSKPTLELLSP-----------IKPSSPIKELDCEP 253
            |.:|.| ::..:||:...:.|..   .||.....|.|.||           :...:...:|.|:.
Zfish  1460 CDQLYT-LSQSDTSAYPDLQKPNLFLLKVVLTAQLPLWSPTSIMRGVNQRLLSQCTEYFDLRCQL 1523

  Fly   254 VDTLSKQQLSEQLQLYPQG--RNLISPVDDA----PSDLFISDA--------------------- 291
            :|.|:..:: ||||:.|..  .:.||.:|:.    .::|..|:|                     
Zfish  1524 LDDLTTSEM-EQLQIGPAAMLEDEISWLDNFEPTWTTELETSEADNILLAGHLRLIKTLLSLCGT 1587

  Fly   292 ----------EQLSDD------------DLALGASASPTMLGP----------GYDYGAPTGDSD 324
                      :||.||            |.:...:||.....|          .|:......||.
Zfish  1588 EKEQFGPSLIQQLLDDFLFRASRIILNSDSSSSTTASIHDFHPKCSTVSSRLAAYEVLVMLADSS 1652

  Fly   325 VEGVTGVTDPSTIGTDDGTYPALSNFYRRKYGGDELRAWQRVNTTGADFVSSATTETEAEARQAS 389
            :..:..:| ...:.....:.|:||..:                    |::      ...::|..|
Zfish  1653 LTNLQLIT-KELLSMHHQSDPSLSKEF--------------------DYL------PPVDSRSIS 1690

  Fly   390 LGPRGYVGLVNQAMTCYLNSLLQALFMTPEFRNALYRWEFDNDNEAKNIPYQLQKLFLNLQTSPK 454
                |:|||.|...|||:|::.|.|:|.|.....:...|.|.:|..:::..|:|.||.:|..|..
Zfish  1691 ----GFVGLKNGGATCYMNAVFQQLYMQPGLPEGVLSIEDDTENPEESVFCQVQSLFGHLMESKL 1751

  Fly   455 AAVETTDLTRSFGWDSTEAW--QQHDIQELCRVMFDALEHKFKNTKQANLISNLYEGKMNDYVKC 517
            ......:..:.|...:.|.:  :|.|..|....:.|.|:...|...:..:..|.::|..:|...|
Zfish  1752 QYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLDEHLKKIGREQIFKNTFQGIFSDQKIC 1816

  Fly   518 LECNTEKTREDTFLDIPLPVRPFGSSSAYGSIEEALRAFVQPETLDGNNQYLCEKCKKKCDAHKG 582
            .:|.....||:||:.:.|.|      ::..|:|.:|..||:.|.|||:|.|.|||||:|....|.
Zfish  1817 KDCPHRYEREETFMALNLGV------TSCQSLEISLDQFVRGEVLDGSNAYYCEKCKEKRTTVKR 1875

  Fly   583 LHFKSFPYILTLHLKRFDFDYQTMHRIKLNDRVTFPQTLNLNTFINRSGNSGEQNSQLNGTVDDC 647
            ...||.|.:|.:||.||.||:::...||.::::.||..||:..:                ||   
Zfish  1876 TCIKSLPSVLVIHLMRFGFDWESGRSIKYDEQIRFPWVLNMEPY----------------TV--- 1921

  Fly   648 STADSGSAMEDDNLSSGVVTTASSSQH-ENDLNDEDEGIDMSSSTSKSAKQGSGPYLYELFAIMI 711
                ||.|.:|           ||:.| ||....|      :.|.....|:.:....|||..:::
Zfish  1922 ----SGMARQD-----------SSADHGENGRGGE------AGSGGSPRKKVTISENYELVGVVV 1965

  Fly   712 HSGSASGGHYYAYIKD---FDNNEWFCFNDQNVTSITQEDIQRSFGGPNGSYYSSAYTSST---- 769
            |||.|..||||::|||   .....|:.|||..|......|....:....|.|....|..|.    
Zfish  1966 HSGQAHAGHYYSFIKDRRGSARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPD 2030

  Fly   770 ------NAYMLMYRQVDAKRNELVAK---VADFPEHIKTLL-----------------PKLHSEE 808
                  |||||.|:::..:.:.::.|   |:...:..:.|.                 |:.:::.
Zfish  2031 VRRRYWNAYMLFYQRISDQNSPVLPKKSRVSIMRQEAEDLSLSAPSSPEISPQSSPRPPRANNDR 2095

  Fly   809 ETRVSRLGRHITVTDLALPDLYKPRVY--FYNPSLKKMKITRVYVSQSFNINLVLMS 863
            .|.::||.:......|.:..: ..|::  ..:.:||.||...||.|..|:..|.|.|
Zfish  2096 LTLLTRLVKKGEKKGLFVEKM-PARIFQMVRDENLKFMKNRDVYNSDYFSFTLSLAS 2151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp47NP_523937.2 DUF4045 <122..249 CDD:433066 12/59 (20%)
peptidase_C19C 394..780 CDD:239124 119/401 (30%)
USP47_C 1300..1534 CDD:466158
usp24XP_005170208.1 UBA_UBP24 7..43 CDD:270472
Ubl_UBP24 955..1033 CDD:340585
peptidase_C19C 1691..2048 CDD:239124 119/402 (30%)
Blue background indicates that the domain is not in the aligned region.

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