DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp47 and faf

DIOPT Version :10

Sequence 1:NP_523937.2 Gene:Usp47 / 38644 FlyBaseID:FBgn0016756 Length:1556 Species:Drosophila melanogaster
Sequence 2:XP_061513163.1 Gene:faf / 1279518 VectorBaseID:AGAMI1_014164 Length:2997 Species:Anopheles gambiae


Alignment Length:209 Identity:39/209 - (18%)
Similarity:62/209 - (29%) Gaps:84/209 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 CRYCPTVVCLNENTMQAHVSSKKHARMEKLVKEGKIRTDDEEVDDLETASQEKEKKGNRRSQRQG 181
            ||.|....||:.......|..||                    .::||......|.|.:|:::..
Mosquito    83 CRSCRHKKCLSNGMKPGGVQPKK--------------------PNIETGRAFFTKSGLKRNKKFA 127

  Fly   182 KRSQKQEKDSLTKNGENEEVEDPETPSQGKQIKENSRARRQRKRLEKQGKGSLTKHGENEEVDNP 246
            ..|                   |:|..:.|.:.|..:.    .::|.|...||    |:.|.||.
Mosquito   128 NVS-------------------PQTADEQKLVVEGVKV----PKIEVQEPNSL----EDLEQDNE 165

  Fly   247 ---ETPSQEKQIKGNSSS-----------------------------RRQLKRSEKQ-----EKI 274
               :||:..|.....|.|                             |.::|..|::     |:.
Mosquito   166 FVIKTPTPRKISSSTSFSASTTTNYSTPGPSPMAPCSAGPDVLTLFIREEMKLGERRRLLFSERA 230

  Fly   275 PSTKEGENEDASQK 288
            ..|..|:|:....|
Mosquito   231 VGTLLGQNKHCPYK 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp47NP_523937.2 DUF4045 <122..249 CDD:433066 23/129 (18%)
peptidase_C19C 394..780 CDD:239124
USP47_C 1300..1534 CDD:466158
fafXP_061513163.1 None
Blue background indicates that the domain is not in the aligned region.

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