DRSC/TRiP Functional Genomics Resources

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Protein Alignment Blimp-1 and PRDM6

DIOPT Version :10

Sequence 1:NP_001261442.1 Gene:Blimp-1 / 38638 FlyBaseID:FBgn0035625 Length:1216 Species:Drosophila melanogaster
Sequence 2:NP_001129711.1 Gene:PRDM6 / 93166 HGNCID:9350 Length:595 Species:Homo sapiens


Alignment Length:739 Identity:154/739 - (20%)
Similarity:243/739 - (32%) Gaps:253/739 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   331 GNGPANGSVAGSVSGA----TPPPPTATPCCRRSSPPAHVSTTTSTCNAHHPHIQHGRHASVIIG 391
            |.||..||.|..:..|    .||||...|  .|:.||                            
Human    31 GAGPLKGSGAAGLLSAPQPLQPPPPPPPP--ERAEPP---------------------------- 65

  Fly   392 QDRSPMASSDKDTAGSPLSGLDHQMTPQDGSVRSVRSDEGYHSNECHEDGLTPPEDSSDSESEHN 456
                                 ...:.|:..|:.|..|              ||...|:.:.|   
Human    66 ---------------------PDSLRPRPASLSSASS--------------TPASSSTSASS--- 92

  Fly   457 YVLDCSKKAIAPKETVIAQAQKPSSSPPAVVMANTTTNSMISHSSPTATPICETDKNEYRKFKVK 521
                               |...:::..|..:|..           :|.|:.:        ..|.
Human    93 -------------------ASSCAAAAAAAALAGL-----------SALPVSQ--------LPVF 119

  Fly   522 MPLKYEFKNKTCVKQEPSLKEVDQEMSLPQEEEEDQVMHPEPDSICPSTTTHL-----------G 575
            .||.     ...|..||          ||            |..:|...|:..           |
Human   120 APLA-----AAAVAAEP----------LP------------PKELCLGATSGPGPVKCGGGGGGG 157

  Fly   576 DEHMLMMERERERERERIQEREPSNQQPASSTVIVLEHNSGGQAR-TIVPLSKPYYEPDPPGERY 639
            .|       .|...|.|....|             |::...||.| .|:||::  :..||.....
Human   158 GE-------GRGAPRFRCSAEE-------------LDYYLYGQQRMEIIPLNQ--HTSDPNNRCD 200

  Fly   640 M----RFGQ-PSSSILETILTSQHRLEAAAAAANACRQANAATPPPTSP---------------- 683
            |    |.|: |....|.::    .||...::||       ||.|||..|                
Human   201 MCADNRNGECPMHGPLHSL----RRLVGTSSAA-------AAAPPPELPEWLRDLPREVCLCTST 254

  Fly   684 -TEMAYSYKKSQR--YGNAVSPDSSSNLGQNPEQLSSSAV-------VVGEQEMTRATMIKGECS 738
             ..:||....:||  .|..:.|.....|  .||::.:.||       .:.:|:.|....|.|   
Human   255 VPGLAYGICAAQRIQQGTWIGPFQGVLL--PPEKVQAGAVRNTQHLWEIYDQDGTLQHFIDG--- 314

  Fly   739 PPPPSHHHHNVIFSPSRHAAYLGAGEAGGHSPSPGYPGYPHYGA-------AATSTFHSPPHSSH 796
             ..||..........:||     .||.  :.....|.....|.|       .....:::..::|.
Human   315 -GEPSKSSWMRYIRCARH-----CGEQ--NLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSF 371

  Fly   797 SPFDRQSNASSGAGSATNLHLLQTSTQ-MLNHPLMQPLTPLQRLSPLR-----ISPPSSLSPDGN 855
            .....|..|..     .||::..|..: |.....:||.....:|:|..     :.|.:..|.:.:
Human   372 FGIPLQCIAQD-----ENLNVPSTVMEAMCRQDALQPFNKSSKLAPTTQQRSVVFPQTPCSRNFS 431

  Fly   856 SCPRSGSPLSP--NSLASRGYRSLPYP-----LKKKDGKMH-YECNVCCKTFGQLSNLKVHLRTH 912
            ...:|| |:..  |.:..:..|.|..|     |..:....| ::|..|.|||.|...|::|:.|.
Human   432 LLDKSG-PIESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQ 495

  Fly   913 SGERPFKCNVCTKSFTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHSGQKPYACD 977
            :.:||::|..|::||:|.:.|:.|.:.|:.::|.:|..|.:.|:..:.|..|:|.|:|:||:.|:
Human   496 NPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCE 560

  Fly   978 LCPQKFTQFVHLKLHKRLHTNDRP 1001
            .|.:.|||...|..|:|:....:|
Human   561 RCERSFTQATQLSRHQRMPNECKP 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Blimp-1NP_001261442.1 PR-SET_PRDM1 120..262 CDD:380964
zf-C2HE <871..912 CDD:465082 13/46 (28%)
C2H2 Zn finger 892..912 CDD:275368 8/19 (42%)
zf-H2C2_2 904..929 CDD:463886 9/24 (38%)
C2H2 Zn finger 920..940 CDD:275368 7/19 (37%)
SFP1 <938..1020 CDD:227516 21/64 (33%)
C2H2 Zn finger 948..968 CDD:275368 6/19 (32%)
C2H2 Zn finger 976..996 CDD:275368 8/19 (42%)
C2H2 Zn finger 1004..1023 CDD:275368
PRDM6NP_001129711.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..90 22/123 (18%)
PR-SET_PRDM6 244..372 CDD:380968 25/140 (18%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
SUF4-like 527..594 CDD:411020 20/58 (34%)
C2H2 Zn finger 531..552 CDD:411020 6/20 (30%)
C2H2 Zn finger 531..551 CDD:275368 6/19 (32%)
zf-H2C2_2 544..568 CDD:463886 10/23 (43%)
C2H2 Zn finger 559..577 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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