DRSC/TRiP Functional Genomics Resources

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Protein Alignment Blimp-1 and Prdm5

DIOPT Version :10

Sequence 1:NP_001261442.1 Gene:Blimp-1 / 38638 FlyBaseID:FBgn0035625 Length:1216 Species:Drosophila melanogaster
Sequence 2:XP_006506667.1 Gene:Prdm5 / 70779 MGIID:1918029 Length:630 Species:Mus musculus


Alignment Length:971 Identity:182/971 - (18%)
Similarity:303/971 - (31%) Gaps:377/971 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 LPRSLTLKSSMVYSTPNVKTEGVWSSGVIPRGTRFGPFEGIPTSNYPNDKNK---ARYFWRVQGT 183
            :|....||||.|..     ..|::::..:.:|.:||||.|  ....|.|.::   .|..|.|:|:
Mouse     6 VPDRFALKSSRVQD-----GMGLYTARRVRKGEKFGPFAG--EKRMPEDLDENMDYRLMWEVRGS 63

  Fly   184 RHITYGNIKIFKDDDYYYLDGSDRSQSNWMRYVASAYSLSVMNLVACQHQENIYFYTTRDILPNE 248
                       |.:..|.||.::...|||:|:|..|.|....||.|.|..|||::....||..:.
Mouse    64 -----------KGEVLYILDATNPRHSNWLRFVHEAPSQERKNLAAIQEGENIFYLAVDDIETDT 117

  Fly   249 ELMVWYCKDFASRLGYDVDPETTIFGACKQAVEAEEEADEEEEEA--EGEDGKPRYSMPAPEIPP 311
            ||::.|                         ::::.||:|||::|  ..::||            
Mouse   118 ELLIGY-------------------------LDSDVEAEEEEQQALTMTKEGK------------ 145

  Fly   312 DVAVSHITYVMGLHLPVGAGNGPANGSV-AGSVSGATPPPPTATPCCRRSSPPAHVSTTTSTCNA 375
               |.|                 :.|.: |||..........|.|.|..|.|...|.|       
Mouse   146 ---VDH-----------------SKGQLAAGSKGHLGCEEDFACPQCESSFPSEEVLT------- 183

  Fly   376 HHPHIQHGRHASVIIGQDRSPMASSDKDTAGSPLSGLDHQMTPQDGSVRSVRSDEGYHSNECHED 440
                 :|                          |..|..:.|             |....:|...
Mouse   184 -----EH--------------------------LQSLHQKPT-------------GEKEFKCENC 204

  Fly   441 GLTPPEDSSDSESEHNYVLDCSKKAIAPKETVIAQAQKPSSSPPAVVMANTTTNSMISHSSPTAT 505
            |...|.    .::...:.|.|:.::          :.|.|||.....:.|:..:|.:|.      
Mouse   205 GKKFPV----RQALQRHALFCTARS----------SLKNSSSSVQCALCNSLFSSALSF------ 249

  Fly   506 PICETDKNEYRKFKVKMPLKYEFKNKTCVKQEPSLKEVDQEMSLPQEEEEDQVMHPEPDSICPST 570
                   .::|| ..:...::..|..:|.|:   ||..|   :|.:.:|......|:...||...
Mouse   250 -------EQHRK-ACRGEARFVCKADSCGKR---LKSKD---ALRRHQENVHTGDPKRKLICSVC 300

  Fly   571 TTHLGDEHMLMMERERERERERIQEREPSNQQPASSTVIVLEHNSGGQARTIVPLSKPYYEPDPP 635
                                          .:..:|...:.||..                    
Mouse   301 ------------------------------NRKCTSVSSLQEHRK-------------------- 315

  Fly   636 GERYMRFGQPSSSILETILTSQHRLEAAAAAANACRQANAATPPPTSPTEMAYSYKKSQRYGNAV 700
                          :..|...|..::...:|....|.              ..::.:.:.|...:
Mouse   316 --------------IHEIFDCQECMKKFISANQLKRH--------------MITHSEKRPYNCEI 352

  Fly   701 SPDSSSNLGQNPEQLSSSAVVVGEQEMTRATMIKGECSPPPPSHHHHNVIFSPSRHAAYLGAGEA 765
            ...|...|.|           ||.                      |.||               
Mouse   353 CNKSFKRLDQ-----------VGA----------------------HKVI--------------- 369

  Fly   766 GGHSPSPGY------PGYPHYGAAATSTFHSPPHSSHSPFDRQSNASSGAGSATNLHLLQTSTQM 824
              ||....|      .|:.|......   |...||...||  |.:|...        |.:|...:
Mouse   370 --HSEDKPYQCKLCGKGFAHRNVYKN---HKKTHSEERPF--QCDACKA--------LFRTPFSL 419

  Fly   825 LNHPLMQPLTPLQRLSPLRISPPSSLSPDGNSCPRSGSPLSPNSLASRGYRSLPYPLKKKDGKMH 889
            ..|.|:.                                                     :.:..
Mouse   420 QRHLLIH-----------------------------------------------------NSERT 431

  Fly   890 YECNVCCKTFGQLSNLKVHLR-THSGERPFKCNVCTKSFTQLAHLQKHHLVHTGEKPHQCDICKK 953
            ::|:.|..||.:...|.||:: .|...:.::|.:|.|:|...:.|:.|...|||||...|..|.:
Mouse   432 FKCHHCDATFKRKDTLNVHVQVVHERHKKYRCELCNKAFVTPSVLRSHKKTHTGEKEKVCPYCGQ 496

  Fly   954 RFSSTSNLKTHLRLHSGQKPYACDLCPQKFTQFVHLKLHKRLHTNDRPYVCQGCDKKYISASGLR 1018
            :|:|:..|:.|:|.|:|::||.|..|.:.|::...||:|.|.||.::||.|..|.|.:....||.
Mouse   497 KFASSGTLRVHIRSHTGERPYQCPYCEKGFSKNDGLKMHIRTHTREKPYQCSECSKAFSQKRGLD 561

  Fly  1019 THWKT-TSCKPNNLEEELAMAAAATSECL-------DKDHPEPDSREAYEQLTQHMHPAVH 1071
            .|.:| |..||  .:.::...|.:..:.|       :.:.|..:....:::.|::.:..||
Mouse   562 EHKRTHTGEKP--FQCDVCDLAFSLKKMLIRHKMTHNPNRPMAECHFCHKKFTRNDYLKVH 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Blimp-1NP_001261442.1 PR-SET_PRDM1 120..262 CDD:380964 42/142 (30%)
zf-C2HE <871..912 CDD:465082 7/41 (17%)
C2H2 Zn finger 892..912 CDD:275368 7/20 (35%)
zf-H2C2_2 904..929 CDD:463886 8/25 (32%)
C2H2 Zn finger 920..940 CDD:275368 6/19 (32%)
SFP1 <938..1020 CDD:227516 32/81 (40%)
C2H2 Zn finger 948..968 CDD:275368 7/19 (37%)
C2H2 Zn finger 976..996 CDD:275368 7/19 (37%)
C2H2 Zn finger 1004..1023 CDD:275368 6/18 (33%)
Prdm5XP_006506667.1 PR-SET_PRDM5 2..128 CDD:380967 42/164 (26%)
C2H2 Zn finger 169..190 CDD:275368 8/58 (14%)
C2H2 Zn finger 201..217 CDD:275368 3/19 (16%)
C2H2 Zn finger 236..256 CDD:275368 5/33 (15%)
COG5048 258..621 CDD:227381 100/565 (18%)
C2H2 Zn finger 264..287 CDD:275368 8/28 (29%)
C2H2 Zn finger 297..317 CDD:275368 4/83 (5%)
C2H2 Zn finger 322..342 CDD:275368 3/33 (9%)
C2H2 Zn finger 350..370 CDD:275368 8/69 (12%)
C2H2 Zn finger 378..398 CDD:275368 3/22 (14%)
C2H2 Zn finger 406..426 CDD:275368 5/27 (19%)
C2H2 Zn finger 434..455 CDD:275368 7/20 (35%)
C2H2 Zn finger 463..483 CDD:275368 6/19 (32%)
C2H2 Zn finger 491..511 CDD:275368 7/19 (37%)
C2H2 Zn finger 519..539 CDD:275368 7/19 (37%)
C2H2 Zn finger 547..567 CDD:275368 6/19 (32%)
C2H2 Zn finger 575..595 CDD:275368 2/19 (11%)
C2H2 Zn finger 604..625 CDD:275368 3/17 (18%)

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