DRSC/TRiP Functional Genomics Resources

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Protein Alignment Blimp-1 and Prdm14

DIOPT Version :10

Sequence 1:NP_001261442.1 Gene:Blimp-1 / 38638 FlyBaseID:FBgn0035625 Length:1216 Species:Drosophila melanogaster
Sequence 2:NP_001074678.2 Gene:Prdm14 / 383491 MGIID:3588194 Length:561 Species:Mus musculus


Alignment Length:184 Identity:59/184 - (32%)
Similarity:95/184 - (51%) Gaps:9/184 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   843 RISPPSSLSPDGNSCPRSGSPLSPNSLASRGYRS--LPYPLKKKDGKMHYECNVCCKTFGQLSNL 905
            ::|..|..|.:|..|.|.|...:     .:.||.  |.|......|...:.|::|.::|.:...|
Mouse   378 QLSESSEESAEGYRCERCGKVFT-----YKYYRDKHLKYTPCVDKGDRKFPCSLCQRSFEKRDRL 437

  Fly   906 KVH-LRTHSGERPFKCNVCTKSFTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHS 969
            ::| |..|...||:.|:.|.|||:|.:.|.||..||:|::|:||..|.|:|:::|.|:||:|.||
Mouse   438 RIHILHVHERHRPYLCSTCGKSFSQSSSLNKHMRVHSGDRPYQCVYCTKKFTASSILRTHIRQHS 502

  Fly   970 GQKPYACDLCPQKFTQFVHLKLH-KRLHTNDRPYVCQGCDKKYISASGLRTHWK 1022
            |:||:.|..|.:.|........| :|.|.::....|..|.|.::.......|.:
Mouse   503 GEKPFKCKHCGKAFASHAAHDSHVRRSHKDNGRSSCDICGKGFLDQEAFYAHMR 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Blimp-1NP_001261442.1 PR-SET_PRDM1 120..262 CDD:380964
zf-C2HE <871..912 CDD:465082 11/43 (26%)
C2H2 Zn finger 892..912 CDD:275368 6/20 (30%)
zf-H2C2_2 904..929 CDD:463886 11/25 (44%)
C2H2 Zn finger 920..940 CDD:275368 9/19 (47%)
SFP1 <938..1020 CDD:227516 28/82 (34%)
C2H2 Zn finger 948..968 CDD:275368 9/19 (47%)
C2H2 Zn finger 976..996 CDD:275368 5/20 (25%)
C2H2 Zn finger 1004..1023 CDD:275368 4/19 (21%)
Prdm14NP_001074678.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Interaction with CBFA2T2. /evidence=ECO:0000269|PubMed:26523391, ECO:0000269|PubMed:27281218 184..373
PR-SET_PRDM14 237..368 CDD:380975
C2H2 Zn finger 392..410 CDD:275368 5/22 (23%)
C2H2 Zn finger 424..445 CDD:275368 6/20 (30%)
COG5048 449..>545 CDD:227381 39/95 (41%)
zf-C2H2 451..473 CDD:395048 9/21 (43%)
C2H2 Zn finger 453..473 CDD:275368 9/19 (47%)
C2H2 Zn finger 481..501 CDD:275368 9/19 (47%)
zf-H2C2_2 494..518 CDD:463886 12/23 (52%)
C2H2 Zn finger 509..527 CDD:275368 4/17 (24%)
C2H2 Zn finger 538..558 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

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