DRSC/TRiP Functional Genomics Resources

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Protein Alignment blanks and Adarb2

DIOPT Version :9

Sequence 1:NP_647966.1 Gene:blanks / 38620 FlyBaseID:FBgn0035608 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_579836.1 Gene:Adarb2 / 117088 RGDID:621519 Length:746 Species:Rattus norvegicus


Alignment Length:335 Identity:79/335 - (23%)
Similarity:126/335 - (37%) Gaps:52/335 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SAEEDAVAVIP--LADNLKKTAMGGENKSDEKGTVSSEPKALSDQITSSMRVTKNKIADDKSSDV 90
            |..:|.|:::.  ||. .|..:.|..|..||..        ||   |||..|.:|:...:..:..
  Rat    30 SKRKDKVSILSTFLAP-FKYLSPGTTNTEDEDN--------LS---TSSAEVKENRNVSNLGTRP 82

  Fly    91 IT--DDATNGRKKQKKNKK----------AKI----RPLTMPVTSKDALMVLNELKGVTVDNM-- 137
            :.  |.|..|.....|.|:          .|:    :.|:..:|.|:||:.|:|||......|  
  Rat    83 LPPGDWARGGSTPSVKRKRPLEEGNGGHFCKLQLIWKKLSWSMTPKNALVQLHELKPGLQYRMVS 147

  Fly   138 QIKRDHEGKIMARVVVNSKKYEAEGSSVNSARNAACEKALQEIL--TTKMKAVL-----DGPGKS 195
            |....|.......|.||...:|..|.:...|:..|.|.||:..:  ....:|.|     ..|...
  Rat   148 QTGPVHAPVFAVAVEVNGLTFEGTGPTKKKAKMRAAEMALKSFVQFPNAFQAHLAMGSSTSPCTD 212

  Fly   196 LESDEDDILEKM-ASYAIHKLGEEW------KTDDIDVA-----TLYNDLKNKQTSVVEPKKPLP 248
            ..||:.|..:.: ..:......|::      .|:.:..|     .||:.|.....::.:..:..|
  Rat   213 FTSDQADFPDTLFKEFEPSSRNEDFPGCCPVDTEFLSSAYRRGRLLYHTLDLMGQALPDRSRLAP 277

  Fly   249 ETWKNMHPCMVLNYMRPQCTFIVSGGTGTNQN-NTFSMSVCVDNCEFNAEGPSKKAARYKLSALV 312
            ......:|.:|||.:|....::....|..... .:|.|:||||...|...|.|||.|:.:.:...
  Rat   278 GALGERNPVVVLNELRSGLRYVCLSETAEKPRVKSFVMAVCVDGRTFEGSGRSKKLAKGQAAQAA 342

  Fly   313 CNKLFGTDYP 322
            ...||....|
  Rat   343 LQALFDIRLP 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
blanksNP_647966.1 None
Adarb2NP_579836.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 2/5 (40%)
R-domain (ssRNA-binding). /evidence=ECO:0000250 23..35 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..105 16/65 (25%)
DSRM 126..190 CDD:238007 21/63 (33%)
DSRM 285..>332 CDD:214634 15/46 (33%)
ADEAMc 367..743 CDD:214718
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352134
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10910
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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