DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyt-c1 and CYT1

DIOPT Version :10

Sequence 1:NP_647958.1 Gene:Cyt-c1 / 38612 FlyBaseID:FBgn0035600 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_014708.1 Gene:CYT1 / 854231 SGDID:S000005591 Length:309 Species:Saccharomyces cerevisiae


Alignment Length:287 Identity:155/287 - (54%)
Similarity:203/287 - (70%) Gaps:13/287 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SSAGSWASGNKKLIGALGAITGGVGA-------LIYA---LEQSVQASGGEVHSPAQLWNHKGLF 83
            |:|...||.:.||...|  :|.||.|       |:||   ..:::.|:...:|:||..|:|.|.|
Yeast    20 STATGAASKSGKLTQKL--VTAGVAAAGITASTLLYADSLTAEAMTAAEHGLHAPAYAWSHNGPF 82

  Fly    84 DALDHQSVRRGYEVYKQVCSACHSMQYIAYRNLVGVTHTEAEAKAEAEQITVKDGPDDTGNYYTR 148
            :..||.|:||||:||::||:||||:..:|:|.||||:||..|.:..||:....|.||:.||...|
Yeast    83 ETFDHASIRRGYQVYREVCAACHSLDRVAWRTLVGVSHTNEEVRNMAEEFEYDDEPDEQGNPKKR 147

  Fly   149 PGKLSDYFPSPYPNEEAARAANNGAYPPDLSYIVSARKGGEDYIFSLLTGYHD-APAGVVLREGQ 212
            |||||||.|.|||||:||||||.||.|||||.||.||.||.||||||||||.| .||||.|..|.
Yeast   148 PGKLSDYIPGPYPNEQAARAANQGALPPDLSLIVKARHGGCDYIFSLLTGYPDEPPAGVALPPGS 212

  Fly   213 YFNPYFPGGAISMAQVLYNEVIEYEDGTPPTQSQLAKDVATFLKWTSEPEHDDRKQLLIKVIGIL 277
            .:|||||||:|:||:||:::::|||||||.|.||:||||.|||.|.:|||||:||:|.:|.:.||
Yeast   213 NYNPYFPGGSIAMARVLFDDMVEYEDGTPATTSQMAKDVTTFLNWCAEPEHDERKRLGLKTVIIL 277

  Fly   278 GFLTVISYYIKRHKWSSLKSRKIVFVP 304
            ..|.::|.::|:.||:.:|:||.||.|
Yeast   278 SSLYLLSIWVKKFKWAGIKTRKFVFNP 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-c1NP_647958.1 Cytochrom_C1 77..295 CDD:426633 131/218 (60%)
CYT1NP_014708.1 CccA <39..>109 CDD:441613 29/69 (42%)
Cytochrom_C1 76..295 CDD:426633 131/218 (60%)

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