DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gen and zgc:110269

DIOPT Version :10

Sequence 1:NP_647943.2 Gene:Gen / 38594 FlyBaseID:FBgn0263831 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001017611.2 Gene:zgc:110269 / 550274 ZFINID:ZDB-GENE-050417-81 Length:350 Species:Danio rerio


Alignment Length:350 Identity:98/350 - (28%)
Similarity:152/350 - (43%) Gaps:72/350 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGVKELWGVL---TPHCER-KPINELRGKKVAIDLAGWVCESLNVVDYF--VHPRH----HLKNL 55
            ||:.:|..::   .|...| |.|.:..||.:|:|.:       .||:.|  ..|.|    .|..|
Zfish     1 MGITKLAHLIHFDAPASMRSKEIGDYSGKIIALDTS-------IVVNQFRSALPGHLKLSPLAGL 58

  Fly    56 FFRTCYLIWEQVTPVFVLEGVAPKLKSQVIAKRNELQFRGVKPKNSPECTQSQ-PSKGDKGRSRF 119
            |:||...:...:.|||||:|..|..|..|:.||.:          |...:.|| |:.|    |.|
Zfish    59 FYRTLAFLEHDIKPVFVLDGKPPHQKRAVLEKRAQ----------STGWSSSQSPNTG----SAF 109

  Fly   120 NHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFAYGAVRVYRNFSVSTQ 184
            |   ::|..||..||:.|::.||||||.||.|.|.|.|:.|.|:|.|..|:|...:.|..:    
Zfish   110 N---QECLRLLHLMGVPCIKAPGEAEALCAHLAKIGTVNAVASEDMDTLAFGGTVLLRQLN---- 167

  Fly   185 GAQAAAGGAVDIYDMREITSRMDFGQQKIIVMALLCGCDYCPDGIGGIGKDGVLKLFNKYKETE- 248
               |.....:..|.:.::...:....::.:.:.:|.||||| |.|||:|....|||..::...| 
Zfish   168 ---AKRDSEITEYSLPKLLEALQLKYEEFVDLCILLGCDYC-DKIGGLGPSRALKLIKEHHTIEG 228

  Fly   249 ILDRMR--------SWRGETDKYNALEI-RVDDKSIC-SNCGHIGKTQSHTKSGCSVCRTHKGCD 303
            :::.:.        :|:.:..:....|. ::||..:. |.....|..|..             |.
Zfish   229 VMEHVNRKTHPIPLNWQYKDARKLFFETPKIDDPVLAWSEPDEEGLVQFL-------------CK 280

  Fly   304 ESLWKEQRL-----SIKSELTLRRK 323
            |...||:|:     ..:..|..|||
Zfish   281 EKPLKEERVRGRMKKFREMLLKRRK 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GenNP_647943.2 PIN_GEN1 2..207 CDD:350217 66/215 (31%)
H3TH_GEN1 210..342 CDD:188625 30/129 (23%)
Chromo_2 400..473 CDD:465841
zgc:110269NP_001017611.2 PIN_SF 1..346 CDD:475124 97/349 (28%)
N-domain 1..95 32/110 (29%)
I-domain 110..223 42/123 (34%)
Interaction with PCNA. /evidence=ECO:0000250 317..325
Blue background indicates that the domain is not in the aligned region.

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