DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gen and exo1

DIOPT Version :10

Sequence 1:NP_647943.2 Gene:Gen / 38594 FlyBaseID:FBgn0263831 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_073783256.1 Gene:exo1 / 406778 ZFINID:ZDB-GENE-040426-2828 Length:845 Species:Danio rerio


Alignment Length:827 Identity:181/827 - (21%)
Similarity:288/827 - (34%) Gaps:249/827 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGVKELWGVLTPHCERKPINELRGKKVAIDLAGWV-------CESL-------NVVDY---FVHP 48
            ||::.|...:....|...:.:.||:.||:|...|:       .|.|       ..|.|   ||. 
Zfish    40 MGIQGLLQFIKDASEPMHVKKYRGQTVAVDTYCWLHKGAFSCAEKLAKGEPTDQYVSYCMKFVD- 103

  Fly    49 RHHLKNLFFRTCYLIWEQVTPVFVLEGVAPKLKSQVIAKRNE-----LQ-----FRGVKPKNSPE 103
                        .|:...|.|:.|.:|.....|.:|...|.|     ||     .|..|...:.|
Zfish   104 ------------MLLSFGVKPILVFDGRNLPSKQEVEKSRRERRQANLQKGKQLLREGKITEARE 156

  Fly   104 C-TQS---QPSKGDKGRSRFNHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVISQD 164
            | |:|   .||..       :.|::...|    .|:.||..|.||:|..|||||..:...||::|
Zfish   157 CFTRSVNITPSMA-------HDVIRAART----RGVDCVVAPYEADAQLAFLNKSDIAQAVITED 210

  Fly   165 SDCFAYGAVRVYRNFSVSTQG---AQAAAGGAVDIYDMREITSRMDFGQQKIIVMALLCGCDYCP 226
            ||..|:|..:|.........|   .|...|....:.::        |.::|...|.:|.||||. 
Zfish   211 SDLLAFGCKKVILKMDKQGNGLEIEQCHLGRCKSLGNI--------FTEEKFRYMCILSGCDYL- 266

  Fly   227 DGIGGIGKDGVLKLFNKYKETEILDRMRSWRGETDKYNALEIRVDDKSICSNCGHIGKTQSH--- 288
            ..:.|||.....||.......:||..::    :..:|..::|.|.::.|      .|.|:::   
Zfish   267 QSLYGIGLGKACKLLRMANNPDILKVIK----KMGQYLKMDISVPEEYI------EGFTKANNTF 321

  Fly   289 -----------------------TKSGCSVCRTHKGCDESLWKEQRLSIKSELTLRRKALLSPDF 330
                                   ..:..|...|:.|.::.|  :..|......|::|....:||.
Zfish   322 LYQLVFDPLRRKVVPLNPYPDHINPAALSYAGTNVGDEKGL--QMALGNLDINTMQRIDDFNPDA 384

  Fly   331 PNEEIIAEFLSEPDTIPNLNLNWR---------QPNLVKFIKQIGHLLQWPEIYCFQKFFPILTR 386
            |.        ::|...|. :.:|.         |.::            |.     |.:.|..|:
Zfish   385 PQ--------TQPPKAPR-SSSWNDRCDKTATTQASI------------WS-----QNYEPGCTK 423

  Fly   387 WQVQQSKQEKILIQPHEIIKKRTVKGVPSLELRWHDPSGIFKGLIPDKQIAEYEAEHPKGIEELY 451
            .|...|.:     :|.....|..:..|.||:|             |.:   |.:.:.|:  |:..
Zfish   424 PQSPTSPK-----RPPPTRGKERIVSVQSLKL-------------PQR---ESQVKRPR--EDTS 465

  Fly   452 YTIEPLDMLETAYPDLVAAFLKSKEKPAKKTTRKKKTASEEENKENE--PNSKPKRVVRKIKAQP 514
            .:::  |:||.     ..|.:| :..|..:.|.|..|.....:|||.  ..|.|.|        |
Zfish   466 LSVD--DLLEQ-----YTAGVK-RHCPETQPTTKPLTNDNMVSKENHCGSTSGPSR--------P 514

  Fly   515 EENQPLLHQFLGRKKEGTPVKAPAPQRQQCSTPITKFLPSDLESDCDAEEFDMSDIVKGIISNPN 579
            ......|.|:..|.:|||      .::..||    :|...|..:..:.:|....|..:.:.|. .
Zfish   515 RNRFATLLQWRNRSEEGT------EEQGTCS----RFFCHDESNIAETQEDSKQDSSQSVESQ-E 568

  Fly   580 AKPALTNHDGHQLHYEPMAE-------------DLSLRLAQMSLG-------------NVNESPK 618
            ...:.:..|...|..||..|             ..|.|.|.:.||             :|:...:
Zfish   569 KHVSQSGGDTSSLCEEPEREQDKDEPSSPPASPSCSSRPASVGLGVFSWSGTTKELNKSVSHPAR 633

  Fly   619 VETKRD--------LSQVDQLPQSK-RFSLEDSFDLLVKGDLQKLARTPVERFKMQHRISEKI-P 673
            ..|:|.        ||.:.|..::| |.|.        .|....|:.:|||.       ||.. .
Zfish   634 DSTERQRSSSTPSGLSTLQQFHRNKARISW--------AGPGLSLSSSPVEG-------SEDAGN 683

  Fly   674 TPVKPLDNISYFFNQSSD-NADVFEELMNSSLVPQDQEDNAEDEEED 719
            :|..|....|.:|:|||. :|.|     .:|||.:|..|..::.:.|
Zfish   684 SPGSPPSQDSAYFSQSSSISASV-----ENSLVTEDNSDKEKERDSD 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GenNP_647943.2 PIN_GEN1 2..207 CDD:350217 59/238 (25%)
H3TH_GEN1 210..342 CDD:188625 30/157 (19%)
Chromo_2 400..473 CDD:465841 14/72 (19%)
exo1XP_073783256.1 None

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