DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tie and Pdgfrl

DIOPT Version :10

Sequence 1:NP_523928.1 Gene:Tie / 38559 FlyBaseID:FBgn0014073 Length:1233 Species:Drosophila melanogaster
Sequence 2:NP_081116.3 Gene:Pdgfrl / 68797 MGIID:1916047 Length:375 Species:Mus musculus


Alignment Length:195 Identity:40/195 - (20%)
Similarity:65/195 - (33%) Gaps:71/195 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NNRKPDRKSAEKTI-------SQSSTARAATIILVLLFIFFSRYLVYASVTMSLMKIHRGNESFC 67
            |..||..|.|:..|       |..|||::.:|::..:                      ||..| 
Mouse    36 NRIKPTNKKAKPKIPKVKDRDSTDSTAKSQSIMMQAM----------------------GNGRF- 77

  Fly    68 SCWLLLLLLVALLLAEAIVAAAAATLSETQTNATNGAIREPPVQLQLQQQQLQLQLQLNATAGD- 131
               ......|:||..:.:......:..|....|.....::..:.::..::..||.| :|:||.| 
Mouse    78 ---QRPAATVSLLAGQTLELRCKGSKVEWSYPAYLDTFKDSRLTVKQSERYGQLTL-VNSTAADT 138

  Fly   132 GE-------------SRNSA-------------EIF--SPGDVDVVGDKPTTYRPSGANRPSIAP 168
            ||             .|:.|             |:|  ||...|||...|        :|.::.|
Mouse   139 GEFSCWEQLCNGYICRRDEAKTGSTYIFFTEKGELFVPSPSYFDVVYLNP--------DRQAVVP 195

  Fly   169  168
            Mouse   196  195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TieNP_523928.1 TyrKc 854..1183 CDD:197581
PdgfrlNP_081116.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..63 9/26 (35%)
IG_like 83..>143 CDD:214653 14/60 (23%)
Ig strand B 92..96 CDD:409448 0/3 (0%)
Ig strand C 100..104 CDD:409448 1/3 (33%)
Ig strand F 140..144 CDD:409448 1/3 (33%)
Ig 278..372 CDD:472250
Ig strand B 289..293 CDD:409353
Ig strand C 304..308 CDD:409353
Ig strand E 340..344 CDD:409353
Ig strand F 354..359 CDD:409353
Ig strand G 367..370 CDD:409353
Blue background indicates that the domain is not in the aligned region.

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