DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tie and Cad96Ca

DIOPT Version :10

Sequence 1:NP_523928.1 Gene:Tie / 38559 FlyBaseID:FBgn0014073 Length:1233 Species:Drosophila melanogaster
Sequence 2:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster


Alignment Length:628 Identity:175/628 - (27%)
Similarity:276/628 - (43%) Gaps:153/628 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   632 VTPRTQTQPSHTTDSSPKILRTTVLTSIRSTVHPRPTSTSTTTSTTTTAPPAVTAPSNEVYIGIV 696
            |||.|..:.|.||..|     .|.||         |.:.:.:|...:..|...|.||..      
  Fly   253 VTPTTPVRISSTTPKS-----RTKLT---------PITANNSTRVESAIPAETTTPSGG------ 297

  Fly   697 ESSSSASPADISSTVIANERDLNMEMRRMNLVTLVLVAVGVIPLAAIILYLVRN--FVIRRRAKQ 759
            ..::|:||..|.|            ::...:..:|.|....:.:|.::.||.|.  ..|.|..|:
  Fly   298 HHNNSSSPITIFS------------LKSGTIPIVVTVGGFFVAIAVLLAYLCRRRLCAISRTLKK 350

  Fly   760 SEVFDVCITDQQPISPVKKVD----SKYQVDDDEDEVDHQHHQHMQHHQNHQNHQNHQHHQAMPM 820
            ::       :::.::  ||.:    |....||..:.:..|..|......|............:..
  Fly   351 TK-------EKEELA--KKSNQSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPWERDQQMGIAT 406

  Fly   821 SQASQRDAN------------HNRYGNN--------------DDKTSLASEFH----DFERSNIR 855
            ||.|....|            ....|:|              ..:.:.|.|.:    :|.|..::
  Fly   407 SQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCDRWEFPRYRLK 471

  Fly   856 LKSLLGEGNFGQVWKAEADDLSGHFGATRIVAVKTIRACSAQVSLKD---EANIMRKLGSHQNVV 917
            ..::||||.|||||:.||.:::|:.|.| .|||||::..:.:|..||   |..:|:.|..|.|||
  Fly   472 FFNILGEGAFGQVWRCEATNINGNEGIT-TVAVKTLKESATEVDRKDLLSELEVMKSLEPHINVV 535

  Fly   918 TLLGACVESEPHMLIMEYAMRGRLLSLLRAARSATNILPASVPGGRSLAPLSPRTLAGFALDIAC 982
            .|||.|.:.:|..:|:||..||:|.:.||::|:..:.  .:..|..::  |:...|..|...:|.
  Fly   536 HLLGCCTDKDPTFVILEYVNRGKLQTYLRSSRAERHY--GNTHGKSNV--LTSCDLTSFMYQVAK 596

  Fly   983 GMEYIAGRRIVHRDLAARNVLLDHNGMCKICDFGMSIDLDAERMRKEQEKNAANDLMRHNAHKFK 1047
            ||:|:..|.|:||||||||:|:..:..||:.|||.:.|:...::.                    
  Fly   597 GMDYLTSRGIIHRDLAARNILITDDHTCKVADFGFARDVITSKIY-------------------- 641

  Fly  1048 FDFGSRYILQHWQHTFGQGQGQGHCSKDQPHGEKKSHHGHDTIGKRHALPIRWMAPESLQYHMFT 1112
                                            |:||.      ||   |||||||.|||..::|:
  Fly   642 --------------------------------ERKSE------GK---LPIRWMATESLYDNIFS 665

  Fly  1113 TETDIWAFGIVLWEIATLGSTPYSQLTGREVIRRVPQGLRPDLPKESRHEFYNLMSRCWHKEPHM 1177
            .::|||:|||::|||.|||||||..::..:|:|:|..|.|.:.|:..|.|.||:|..||..:|..
  Fly   666 VKSDIWSFGILMWEIVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQE 730

  Fly  1178 RPSFAQSRLEITRSLHKWVDDDSAASDYMDVSGFSEDLEHGVV 1220
            ||.||    ||.:.|.|.:..:   .||:::..|.:...:.:|
  Fly   731 RPLFA----EIIQMLDKLLHTE---MDYIELERFPDHNYYNIV 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TieNP_523928.1 TyrKc 854..1183 CDD:197581 117/331 (35%)
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
PTKc 474..742 CDD:270623 120/337 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.