DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tie and Ntrk3

DIOPT Version :10

Sequence 1:NP_523928.1 Gene:Tie / 38559 FlyBaseID:FBgn0014073 Length:1233 Species:Drosophila melanogaster
Sequence 2:NP_001257585.1 Gene:Ntrk3 / 29613 RGDID:3214 Length:864 Species:Rattus norvegicus


Alignment Length:607 Identity:157/607 - (25%)
Similarity:244/607 - (40%) Gaps:144/607 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   639 QPSHTTDSSPKILRTTVLTSIRSTVH------PRPTST---STTTSTTTTAPPAVTAPSNEVYIG 694
            :|:|..:.:..::....|.:...|::      |.|.||   ...:..:.|.|..||....|...|
  Rat   367 KPTHYNNGNYTLIAKNALGTANQTINGHFLKEPFPESTDFFDFESDASPTPPITVTHKPEEDTFG 431

  Fly   695 IVESSSSASPADISSTVIANERDLNMEMRRMNLVTLVLVAVGVIPLAAIILYLVRNFVIRRRAKQ 759
                                                |.:|||:...|.::|.::  |::..:..:
  Rat   432 ------------------------------------VSIAVGLAAFACVLLVVL--FIMINKYGR 458

  Fly   760 SEVFDVCITDQQPISPVKKVDSKYQVDDDEDEVDHQHHQHMQHHQNHQNHQNHQHHQAMPMSQAS 824
            ...|.:    :.|::         .:..:||.....||.:              |....|.|..:
  Rat   459 RSKFGM----KGPVA---------VISGEEDSASPLHHIN--------------HGITTPSSLDA 496

  Fly   825 QRDA--------------NHNRYGNNDDKTSLASEFHDFERSNIRLKSLLGEGNFGQVWKAEADD 875
            ..|.              .:.|.|:|..|..  :.....:|.:|.||..||||.||:|:.||..:
  Rat   497 GPDTVVIGMTRIPVIENPQYFRQGHNCHKPD--TYVQHIKRRDIVLKRELGEGAFGKVFLAECYN 559

  Fly   876 LSGHFGATR---IVAVKTIR--ACSAQVSLKDEANIMRKLGSHQNVVTLLGACVESEPHMLIMEY 935
            ||    .|:   :||||.::  ..:|:...:.||.::..| .|:::|...|.|.:.:|.:::.||
  Rat   560 LS----PTKDKMLVAVKALKDPTLAARKDFQREAELLTNL-QHEHIVKFYGVCGDGDPLIMVFEY 619

  Fly   936 AMRGRLLSLLRAARSATNIL----PASVPGGRSLAPLSPRTLAGFALDIACGMEYIAGRRIVHRD 996
            ...|.|...|||......||    |....|...|:     .:...|..||.||.|:|.:..||||
  Rat   620 MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS-----QMLHIASQIASGMVYLASQHFVHRD 679

  Fly   997 LAARNVLLDHNGMCKICDFGMSIDLDAERMRKEQEKNAANDLMRHNAHK---FKFDFGSRYILQH 1058
            ||.||.|:..|.:.||.|||||.|:            .:.|..|...::   |...:..:.:...
  Rat   680 LATRNCLVGANLLVKIGDFGMSRDV------------YSTDYYREGPYQKGPFSVSWQQQRLAAS 732

  Fly  1059 WQHTFGQGQGQGHCSKDQPHGEKKSHHGHDTIGKRHALPIRWMAPESLQYHMFTTETDIWAFGIV 1123
            ...|.....|...|...:             :|....||||||.|||:.|..||||:|:|:||::
  Rat   733 AASTLFNPSGNDFCIWCE-------------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVI 784

  Fly  1124 LWEIATLGSTPYSQLTGREVIRRVPQGLRPDLPKESRHEFYNLMSRCWHKEPHMRPSFAQSRLEI 1188
            ||||.|.|..|:.||:..|||..:.||...:.|:....|.|::|..||.:||..|.:..    ||
  Rat   785 LWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIK----EI 845

  Fly  1189 TRSLHKWVDDDSAASDYMDVSG 1210
            .:.||..   ..|...|:|:.|
  Rat   846 YKILHAL---GKATPIYLDILG 864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TieNP_523928.1 TyrKc 854..1183 CDD:197581 113/340 (33%)
Ntrk3NP_001257585.1 ig 214..299 CDD:395002
Ig strand B 227..231 CDD:409353
Ig strand C 240..244 CDD:409353
Ig strand E 266..270 CDD:409353
Ig strand F 281..286 CDD:409353
Ig strand G 294..297 CDD:409353
IgI_TrKABC_d5 304..396 CDD:409360 4/28 (14%)
Ig strand A 305..311 CDD:409360
Ig strand A' 313..316 CDD:409360
Ig strand B 319..327 CDD:409360
Ig strand C 330..337 CDD:409360
Ig strand C' 340..343 CDD:409360
Ig strand D 348..354 CDD:409360
Ig strand E 358..366 CDD:409360
Ig strand F 374..382 CDD:409360 0/7 (0%)
Ig strand G 385..393 CDD:409360 1/7 (14%)
PTKc_TrkC 532..857 CDD:270676 119/366 (33%)
LRRNT 31..>51 CDD:396168
LRR_8 103..160 CDD:404697
LRR 1 104..125
leucine-rich repeat 105..128 CDD:275378
LRR 2 128..149
leucine-rich repeat 129..151 CDD:275378
leucine-rich repeat 152..164 CDD:275378
LRRCT_2 163..208 CDD:465313
Blue background indicates that the domain is not in the aligned region.

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