Protein Alignment CG1316 and rbm45

DIOPT Version :10

• Sequence 1: NP_647887.1
• Gene: CG1316 / 38526
• FlyBaseID: FBgn0035526
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_001120874.1
• Gene: rbm45 / 568524
• ZFINID: ZDB-GENE-070122-4
• Length: 467
• Species: Danio rerio
• Alignment Length: 468
• Identity: 171/468 - (36%)
• Similarity: 272/468 - (58%)
• Gaps: 63/468 - (13%)

  Fly    23 DDPPMSRLFIICNKAHTEEDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDAAKAQEE 87
            |:||.||||::.:|:.||:..||:|:.:|||:||||||||.|:|:||:|::||:|:|.|..|.||
Zfish    12 DEPPNSRLFLVTSKSITEDTIRESFASFGEIQDIWVVKDKQTKESKGVAFIKFAKSSQACTAMEE 76

  Fly    88 MNGKTIGKMDRTLKVLVAANRNQGSNKSENEQEKYVRLFIVIPKTATEEDIREEFSQWGDVESVT 152
            |:|:.:.:..:.:||.:|.:|:.||:: :.|.|:..|:|::||||.||:|::|.|..:||:|...
Zfish    77 MHGRCLAEGTKPIKVFIAQSRSSGSHR-DVEDEELTRIFVMIPKTFTEDDLKETFKVYGDIEYAI 140

  Fly   153 IVKEKNNGNPKGFGYVRFTKFYYAAVAFENCSAKYKAVFAEPK-GSTRTQRDQYGRPSEDNPLYS 216
            |::.|..|:.||.|||||.|...||.|.|||...::|:.|||: .::....|.:..|....  :|
Zfish   141 IIRNKTTGDSKGLGYVRFHKPSQAAKAVENCDKTFRAIIAEPRTKNSSADNDYFSNPRTTE--HS 203

  Fly   217 SSGRGNSNFNGGGSSSGGGGSNSYNNDWNVSQNNDMAAFLRMQNVPVAQPSCLEVNVSNCVNQDQ 281
            :|..|:|::.....||....:.||::|                    ....||.|:....|:|:|
Zfish   204 TSELGSSSYAFAQESSSYSAAESYSSD--------------------IITRCLMVSSRVSVSQEQ 248

  Fly   282 LWRLFDIIPGLDYCQIMR-EHGPRTNEALVVYDNPEAAIYAKDKLHGLEYPMGERIIVKV----- 340
            ::.|||:|||||||:|.| ::|....:.:|.|.|..:|:|||:||:|.|||.|.|:.|..
Zfish   249 IYSLFDLIPGLDYCEIQRDQYGFSKGQVVVRYSNLGSAVYAKEKLNGFEYPPGNRLSVSFVDDGE 313

  Fly   341 -----------------------NGMSSAR-MDTSF------IDKRTKKDAICNVPLPPTQPLAS 375
                                   ||.|.:: |.||.      :.::.:.....|:|.|  :.|.:
Zfish   314 DRTSPVGKMAMQLVAAQMMSMVWNGPSGSQLMKTSAGYTAPPVPQKARLQTDANLPAP--KKLLA 376

  Fly   376 PDDQVAQRLFIVLSAN-LPHSILKNIFSCWSGLIDVYLLPNKNCGYVKYAEVESAQLAIRTLNGA 439
            .|..|.:|||::.:.: ||..:|:::|..:..||:|||:|.:|.||:|||:..||..||.|::|.
Zfish   377 LDSVVKERLFVIFNPSPLPVEVLEDVFCRFGSLIEVYLVPGRNVGYIKYADRRSAHDAIDTMHGK 441

  Fly   440 EICGTKIKVMEAE 452
            .:.|.|:|||.|:
Zfish   442 VVNGVKMKVMLAD 454

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1316	NP_647887.1	RRM1_RBM45	25..105	CDD:409801	40/79 (51%)
		RRM_SF	122..195	CDD:473069	34/72 (47%)
		RRM3_RBM45	267..339	CDD:409803	34/72 (47%)
		RRM4_RBM45	383..449	CDD:409804	28/66 (42%)
rbm45	NP_001120874.1	RRM1_RBM45	14..94	CDD:409801	40/79 (51%)
		RRM2_RBM45	110..183	CDD:409802	34/72 (47%)
		RRM3_RBM45	234..307	CDD:409803	34/72 (47%)
		RRM4_RBM45	384..451	CDD:409804	28/66 (42%)