DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG1316 and CG7903

Sequence 1:NP_647887.1 Gene:CG1316 FlyBaseID:FBgn0035526 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_651755.2 Gene:CG7903 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster

Alignment Length:255 Identity:65/256 (25%)
Similarity:93/256 (36%) Gaps:86/256 (34%)


  Fly    41 EDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDAAKAQEEMNGKTIGKMDRTLKVLVA 105
            |:.|..|:.||.:.:..|:       |: .|:|....|..|..|...:|| ||.|..   .::|.
  Fly    18 EELRRLFTNYGSVVECDVM-------NR-CAFVHLENTDMAEAAIAALNG-TIFKGQ---PIVVE 70

  Fly   106 ANRNQ---------------------------GSNKSENEQE-KYVRLFIVIPKTATEEDIREEF 142
            |.|.:                           |::|..:|.. .:.|.|        .|::...|
  Fly    71 AGRPKYGPGGGSRGQPGSGDNPGRRPSQVQGGGADKRPHESNTNFKRNF--------REEVGGRF 127

  Fly   143 SQWGDVESVTIVKEKNNGNPKGFGYVRFTKFY-------YAAVAFENCSAK----YKAVFA---- 192
            |..|        ...:|.:...||.||....|       |:.....|.|:.    ::..||    
  Fly   128 SNEG--------PRSSNSSAAKFGPVRNESNYRQQRSAPYSKGPPNNESSNQGQGFRNKFAGGGK 184

  Fly   193 -------EPK-GSTR-TQRDQYG-----RPSEDNPLYSSSGRG-NSNFNGGGSSSGGGGS 237
                   |.: ||.| .|||..|     |..:::|.....|.| ||:|.||.||||||||
  Fly   185 FGGSAGNEGRFGSNRFQQRDNSGPQPGRRNFKNSPTSGYRGGGNNSDFQGGSSSSGGGGS 244

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG1316NP_647887.1 RRM1_RBM45 25..105 CDD:240812 18/64 (28%)
RRM2_RBM45 122..195 CDD:240813 18/95 (19%)
RRM3_RBM45 267..339 CDD:240814
RRM4_RBM45 383..449 CDD:240815
CG7903NP_651755.2 RRM <4..168 CDD:223796 37/178 (21%)
RRM_SF 6..70 CDD:302621 18/64 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C68566259
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.930

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