Protein Alignment: CG1316 and CG5213

• Sequence 1: NP_647887.1
• Gene: CG1316
• FlyBaseID: FBgn0035526
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_650473.1
• Gene: CG5213
• FlyBaseID: FBgn0038345
• Length: 251
• Species: Drosophila melanogaster
• Alignment Length: 224
• Identity: 58/225 (26%)
• Similarity: 91/225 (40%)
• Gaps: 32/225 (14%)

  Fly    22 DDDPPMSRLFIICN-------KAHTEEDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTS 79
            |..||:..|.:..|       :..||.:....||.:|||....:::.:.|..:....:|.:....
  Fly    29 DPPPPLPNLRMKTNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSER 93

  Fly    80 DAAKAQEEMNG-KTIGKMDRTLKVLVAANRNQGSNKSENEQEKYVRLFI-VIPKTATEEDIREEF 142
            .||.|...|:| :|.||   .|||..|......|..|.        |:: .:|....|:.:||.|
  Fly    94 QAAAAVNGMDGYETRGK---RLKVAFARPSEYESTSSS--------LYVGNLPTYMDEKKVRELF 147

  Fly   143 SQWGDVESVTIVKEKNNGNPKGFGYVRFTKFYYAAVA--------FENCS--AKYKAVFAEPKGS 197
            :.:|::..|.:::.|.|...:|..:::|.....|.||        .|..|  ...|.|..|.|||
  Fly   148 ATYGNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEVAKYGMDRYMIEGASRPLTVKFVEREKKGS 212

  Fly   198 TRTQR-DQY-GRPSEDNPLYSSSGRGNSN 224
            :.|.. .|| .:.....|.|....|.|.:
  Fly   213 SSTSSGSQYKDKRKSSPPPYKRRERTNDH 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1316	NP_647887.1	RRM1_RBM45	25..105	CDD:240812	24/88 (27%)
		RRM2_RBM45	122..195	CDD:240813	20/84 (24%)
		RRM3_RBM45	267..339	CDD:240814
		RRM4_RBM45	383..449	CDD:240815
CG5213	NP_650473.1	RRM1_Hu_like	41..117	CDD:240821	21/79 (27%)
		RRM	128..202	CDD:214636	17/82 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930				C69017898
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
	1	0.930