Protein Alignment CG1316 and Rbp9

DIOPT Version :9

• Sequence 1: NP_647887.1
• Gene: CG1316 / 38526
• FlyBaseID: FBgn0035526
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_001259974.1
• Gene: Rbp9 / 33498
• FlyBaseID: FBgn0010263
• Length: 684
• Species: Drosophila melanogaster
• Alignment Length: 372
• Identity: 82/372 - (22%)
• Similarity: 161/372 - (43%)
• Gaps: 51/372 - (13%)

  Fly    20 SNDDDPPMSRLFIICNKAHTEEDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDAAKA 84
            :|:.||..:.:.....:..::::.|..|..:||:|...:::||.|.::.|..:|.:.|..||.||
  Fly   103 NNEPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKA 167

  Fly    85 QEEMNGKTIGKMDRTLKVLVAANRNQGSNKSENEQEKYVRLFIV-IPKTATEEDIREEFSQWGDV 148
            ...:||..:  .::|:||.:|        :..:|..|...|::. :||..|:.|:...||.:|.:
  Fly   168 INALNGLRL--QNKTIKVSIA--------RPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKI 222

  Fly   149 ESVTIVKEKNNGNPKGFGYVRFTKFYYAAVAFENCSAKYKAVFAEPKGSTRTQRDQYGRPSEDN- 212
            .:..|:.:...|..||.|::||.:.:.|..|.:..:.      ..||.||.....::......|
  Fly   223 ITSRILCDNITGLSKGVGFIRFDQRFEADRAIKELNG------TTPKNSTEPITVKFANNPSSNK 281

  Fly   213 -----------PLYSSSGRGNSNFNGGGSSSGGGGSNSYNNDWNVSQ--------NNDMAAFLRM 258
                       |..:..||........|:::....:..:.|....|.        .:|:.....:
  Fly   282 NSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYSPLTSDLITNGMI 346

  Fly   259 QNVPVAQPS-CLEV-NVSNCVNQDQLWRLFDIIPGLDYCQIMREHGPRTNE----ALVVYDNPEA 317
            |...:|... |:.| |::....::.||:||.....:...:::|:  .::|:    ..|...|.|.
  Fly   347 QGNTIASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRD--LQSNKCKGFGFVTMTNYEE 409

  Fly   318 AIYAKDKLHGLEYPMGERIIVKVNGMSSARMDTSFIDKRTKKDAICN 364
            |:.|...|:|  |.:|.|:: :|:..::....|..:   ||..|:.|
  Fly   410 AVLAIQSLNG--YTLGNRVL-QVSFKTNKNKQTXLL---TKLAAVVN 450

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1316	NP_647887.1	RRM1_RBM45	25..105	CDD:240812	21/79 (27%)
		RRM2_RBM45	122..195	CDD:240813	17/73 (23%)
		RRM3_RBM45	267..339	CDD:240814	19/77 (25%)
		RRM4_RBM45	383..449	CDD:240815
Rbp9	NP_001259974.1	ELAV_HUD_SF	107..438	CDD:273741	76/351 (22%)
		RRM1_Hu	109..186	CDD:241094	20/78 (26%)
		RRM2_Hu	196..274	CDD:241096	21/83 (25%)
		RRM3_Hu	355..432	CDD:240823	20/81 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439656
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840