Protein Alignment: CG1316 and elav

• Sequence 1: NP_647887.1
• Gene: CG1316
• FlyBaseID: FBgn0035526
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_001245447.1
• Gene: elav
• FlyBaseID: FBgn0260400
• Length: 483
• Species: Drosophila melanogaster
• Alignment Length: 398
• Identity: 90/399 (23%)
• Similarity: 160/399 (40%)
• Gaps: 113/399 (28%)

  Fly     5 RSQSRSGG--GRGGQEYSNDDDPPMSRLFI-ICNKAHTEEDFREAFSPYGEIEDIWVVKDK---- 62
            ::|..:.|  |.|.|..||......:.|.: ...:..||::.|..||..||||.:.:::||
  Fly   124 QAQPNTNGNAGSGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVY 188

  Fly    63 ---------HTQENKGIAYVKFSKTSDAAKAQEEMNGKTIGKMDRTLKVLVAANRNQGSNKSENE 118
                     ...::.|..:|.:.:..||.:|...:||..:  .::|:||..|        :..::
  Fly   189 IDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRL--QNKTIKVSFA--------RPSSD 243

  Fly   119 QEKYVRLFIV-IPKTATEEDIREEFSQWGDVESVTIVKEKNNGN---PKGFGYVRFTKFYYAAVA 179
            ..|...|::. :|||.|::::...|:.:|.:.:..|:  :|.||   .||.|::||.|...|..|
  Fly   244 AIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRIL--QNAGNDTQTKGVGFIRFDKREEATRA 306

  Fly   180 F--------ENCSAKYKAVFAEPKGSTRTQRDQYGRPSEDNP---------LYSSSGRGNSNF-- 225
            .        .:|:......|:...||| ::..|...|:..||         :::...:|.:.|
  Fly   307 IIALNGTTPSSCTDPIVVKFSNTPGST-SKIIQPQLPAFLNPQLVRRIGGAMHTPVNKGLARFSP 370

  Fly   226 -----------NGGGS--------SSGGGGSNSYNNDWNVSQNNDMAAFLRMQNVPVAQPSCLEV 271
                       ||.|:        :||.||                           |.|..: .
  Fly   371 MAGDMLDVMLPNGLGAAAAAATTLASGPGG---------------------------AYPIFI-Y 407

  Fly   272 NVSNCVNQDQLWRLFDIIPGLDYCQIMREHGPRTNE-------ALVVYDNPEAAIYAKDKLHGLE 329
            |::....:..||:||.....:...:|:::  |.||:       ::..||....||.|   |:|
  Fly   408 NLAPETEEAALWQLFGPFGAVQSVKIVKD--PTTNQCKGYGFVSMTNYDEAAMAIRA---LNG-- 465

  Fly   330 YPMGERII 337
            |.||.|::
  Fly   466 YTMGNRVL 473

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1316	NP_647887.1	RRM1_RBM45	25..105	CDD:240812	22/94 (23%)
		RRM2_RBM45	122..195	CDD:240813	21/85 (25%)
		RRM3_RBM45	267..339	CDD:240814	20/79 (25%)
		RRM4_RBM45	383..449	CDD:240815
elav	NP_001245447.1	ELAV_HUD_SF	146..483	CDD:273741	83/377 (22%)
		RRM1_Hu	148..238	CDD:241094	22/92 (24%)
		RRM2_Hu	248..327	CDD:241096	21/81 (26%)
		RRM3_Hu	402..478	CDD:240823	21/81 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			P	PTHR10352
RoundUp	0	0.000	Not matched by this tool.
	1	1.100