DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG1316 and elav

DIOPT Version :9

Sequence 1:	NP_647887.1	Gene:	CG1316 / 38526	FlyBaseID:	FBgn0035526	Length:	470	Species:	Drosophila melanogaster
Sequence 2:	NP_001245447.1	Gene:	elav / 31000	FlyBaseID:	FBgn0260400	Length:	483	Species:	Drosophila melanogaster

Alignment Length:	398	Identity:	90/398 - (22%)
Similarity:	160/398 - (40%)	Gaps:	113/398 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 RSQSRSGG--GRGGQEYSNDDDPPMSRLFI-ICNKAHTEEDFREAFSPYGEIEDIWVVKDK---- 62
            ::|..:.|  |.|.|..||......:.|.: ...:..||::.|..||..||||.:.:::||
  Fly   124 QAQPNTNGNAGSGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVY 188

  Fly    63 ---------HTQENKGIAYVKFSKTSDAAKAQEEMNGKTIGKMDRTLKVLVAANRNQGSNKSENE 118
                     ...::.|..:|.:.:..||.:|...:||..:  .::|:||..|        :..::
  Fly   189 IDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRL--QNKTIKVSFA--------RPSSD 243

  Fly   119 QEKYVRLFIV-IPKTATEEDIREEFSQWGDVESVTIVKEKNNGN---PKGFGYVRFTKFYYAAVA 179
            ..|...|::. :|||.|::::...|:.:|.:.:..|:  :|.||   .||.|::||.|...|..|
  Fly   244 AIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRIL--QNAGNDTQTKGVGFIRFDKREEATRA 306

  Fly   180 F--------ENCSAKYKAVFAEPKGSTRTQRDQYGRPSEDNP---------LYSSSGRGNSNF-- 225
            .        .:|:......|:...||| ::..|...|:..||         :::...:|.:.|
  Fly   307 IIALNGTTPSSCTDPIVVKFSNTPGST-SKIIQPQLPAFLNPQLVRRIGGAMHTPVNKGLARFSP 370

  Fly   226 -----------NGGGS--------SSGGGGSNSYNNDWNVSQNNDMAAFLRMQNVPVAQPSCLEV 271
                       ||.|:        :||.||                           |.|..: .
  Fly   371 MAGDMLDVMLPNGLGAAAAAATTLASGPGG---------------------------AYPIFI-Y 407

  Fly   272 NVSNCVNQDQLWRLFDIIPGLDYCQIMREHGPRTNE-------ALVVYDNPEAAIYAKDKLHGLE 329
            |::....:..||:||.....:...:|:::  |.||:       ::..||....||.|   |:|
  Fly   408 NLAPETEEAALWQLFGPFGAVQSVKIVKD--PTTNQCKGYGFVSMTNYDEAAMAIRA---LNG-- 465

  Fly   330 YPMGERII 337
            |.||.|::
  Fly   466 YTMGNRVL 473

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG1316	NP_647887.1	RRM1_RBM45	25..105	CDD:240812	22/93 (24%)
		RRM2_RBM45	122..195	CDD:240813	21/84 (25%)
		RRM3_RBM45	267..339	CDD:240814	20/78 (26%)
		RRM4_RBM45	383..449	CDD:240815
elav	NP_001245447.1	ELAV_HUD_SF	146..483	CDD:273741	83/376 (22%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910