Protein Alignment CG1316 and rbm45

DIOPT Version :10

• Sequence 1: NP_647887.1
• Gene: CG1316 / 38526
• FlyBaseID: FBgn0035526
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: XP_002935727.1
• Gene: rbm45 / 100379755
• XenbaseID: XB-GENE-987235
• Length: 475
• Species: Xenopus tropicalis
• Alignment Length: 529
• Identity: 178/529 - (33%)
• Similarity: 271/529 - (51%)
• Gaps: 120/529 - (22%)

  Fly     1 MSDYRSQSRSGGGRGGQEYSNDDDPPMSRLFIICNKAHTEEDFREAFSPYGEIEDIWVVKDKHTQ 65
            |.|......|||        |.:|||.||:|::.:|..||:..||.||.:|:|:||||||||.|:
 Frog     1 MEDSSGFRPSGG--------NLEDPPNSRVFLVVSKYVTEDLIRERFSDFGDIQDIWVVKDKQTK 57

  Fly    66 ENKGIAYVKFSKTSDAAKAQEEMNGKTIGKMDRTLKVLVAANRNQGSNKSENEQEKYVRLFIVIP 130
            |:||||:||::|:|.|.||.|||:|:.:.:..:.:||.:|.:|...|:: :.|.|:..|:|::||
 Frog    58 ESKGIAFVKYAKSSQACKAMEEMHGRCLSESTKPIKVFIAQSRGSTSHR-DVEDEELTRIFVMIP 121

  Fly   131 KTATEEDIREEFSQWGDVESVTIVKEKNNGNPKGFGYVRFTKFYYAAVAFENCSAKYKAVFAEPK 195
            |:.||||::::|.::|.:|..:|:|.||.|..||..||||.|...||:|.|||...:||:.||||
 Frog   122 KSYTEEDVKQKFKEYGQIEYCSIIKNKNTGESKGLAYVRFLKPSQAALAIENCDRSFKAILAEPK 186

  Fly   196 GSTRTQRDQYGRPSEDNPLYSSSGRGNSNFNGGGSSSGGGGSNSYNNDWN---VSQNN------- 250
                                          |.|| |.||...|.|:|...   :.|::
 Frog   187 ------------------------------NKGG-SGGGAAENDYHNSARQEAMMQHDHAAAAAT 220

  Fly   251 -----------DMAAFLRMQN------VPVAQPSCLEVNVSNCVNQDQLWRLFDIIPGLDYCQIM 298
                       |.:|..|.|.      :.|::...:         |:|...|||::|||:||::.
 Frog   221 VFPYEYDYASYDKSADARTQETISKRLIVVSRLPLI---------QEQAHNLFDLVPGLEYCEVQ 276

  Fly   299 REHGPRTNEALVVYDNPEAAIYAKDKLHGLEYPMGER-----------------------IIVKV 340
            |:.......|:|.|.|..:|||||.||||.|||.|.|                       :..:|
 Frog   277 RDPYNSFGHAIVQYQNISSAIYAKFKLHGFEYPPGNRLGVSYLNDGGDGSELLRKMASQMVAAQV 341

  Fly   341 NGM---SSARMDT---------SFIDKRTKKDAICNVPLPPTQPLASPDDQVAQRLFIVLSAN-L 392
            :.|   ||....|         |.:..:.:.||    .:|..:..|..|.|..:|||||.:.: |
 Frog   342 SSMVWGSSQHYPTAPPYERPYASPVTSQLQTDA----AIPSVKKKAPSDAQSKERLFIVFNPHPL 402

  Fly   393 PHSILKNIFSCWSGLIDVYLLPNKNCGYVKYAEVESAQLAIRTLNGAEICGTKIKVMEAEERSGS 457
            |..:::::|..:..||:||::|.||.||.:||::.||..||..|:|..:.|.|:|||:|:    |
 Frog   403 PLDVMEDVFCRFGNLIEVYIVPGKNVGYARYADLSSANDAIAVLHGKMVNGVKLKVMQAD----S 463

  Fly   458 DGDDGGRKR 466
            ..|:..:::
 Frog   464 PRDESNKRQ 472

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1316	NP_647887.1	RRM1_RBM45	25..105	CDD:409801	41/79 (52%)
		RRM_SF	122..195	CDD:473069	34/72 (47%)
		RRM3_RBM45	267..339	CDD:409803	29/94 (31%)
		RRM4_RBM45	383..449	CDD:409804	28/66 (42%)
rbm45	XP_002935727.1	RRM1_RBM45	17..97	CDD:409801	41/79 (52%)
		RRM2_RBM45	113..186	CDD:409802	34/72 (47%)
		RRM3_RBM45	245..317	CDD:409803	30/80 (38%)
		RRM4_RBM45	392..459	CDD:409804	28/66 (42%)