DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1309 and AT1G66900

DIOPT Version :10

Sequence 1:NP_647880.1 Gene:CG1309 / 38519 FlyBaseID:FBgn0035519 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_176862.2 Gene:AT1G66900 / 843008 AraportID:AT1G66900 Length:272 Species:Arabidopsis thaliana


Alignment Length:232 Identity:56/232 - (24%)
Similarity:98/232 - (42%) Gaps:46/232 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 GRAKLIE----DDNGIRYKVKTIDSNEIDTLFIDNRPNNVGNGKTLVICSEGNAG----FYEVGI 260
            ||..:.|    ||..| .|::|...|||..:::   .::..||..|.  |.|||.    .:|:.:
plant    32 GRLYIPEIPRRDDVDI-LKLRTRCGNEIVAVYV---KHSKANGTLLY--SHGNAADLGQMFELFV 90

  Fly   261 MATPVALKYSVLGWNHPGFAGSTGTPHPHQDKNAIDAVVQFAINNLRFPVED--IILYGWSIGGF 323
            ..:. .|:.:::|:::.|:..|||  ...:.....|....:.....::.|:|  :|:||.|:|..
plant    91 ELSN-RLRVNLMGYDYSGYGQSTG--QASECNTYADIEASYKCLKEKYGVKDDQLIVYGQSVGSG 152

  Fly   324 STLYAASVYPDVKGVVLDATFDDVLYLAVPRMPAALAGIVKVAIRNYCN-----LNNAELANEFN 383
            .|:..||..|:::||||....              |:| ::|.....|.     ..|.:......
plant   153 PTVDLASRTPNLRGVVLQCPI--------------LSG-MRVLYPVKCTYWFDIYKNIDKIGSVT 202

  Fly   384 GPISFIRRTEDEIIAEDNHIDTNRGNFLVLSVLKHRY 420
            .|:..|..|.||:      :|.:.|..| ..:.|.:|
plant   203 CPVLVIHGTADEV------VDWSHGKRL-WELSKEKY 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1309NP_647880.1 FrsA 236..>347 CDD:440691 30/116 (26%)
AT1G66900NP_176862.2 FrsA 40..245 CDD:440691 53/224 (24%)

Return to query results.
Submit another query.