DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14997 and sqrd-1

DIOPT Version :9

Sequence 1:NP_647877.1 Gene:CG14997 / 38514 FlyBaseID:FBgn0035515 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001255798.1 Gene:sqrd-1 / 178374 WormBaseID:WBGene00008538 Length:471 Species:Caenorhabditis elegans


Alignment Length:464 Identity:186/464 - (40%)
Similarity:260/464 - (56%) Gaps:63/464 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 QVLVVGGGTGGCAMAAKLSSRLGSDKVVVLEPEDKHYYQPMFTLIGGGMKRLDQSHRQMADVLPT 109
            ::||||||.||...|:|.:.:|....|.::||.:.|||||.|||:|||:..|:.:..:..|::|.
 Worm    13 KLLVVGGGAGGLGAASKFARKLPRGSVGIIEPREDHYYQPGFTLVGGGLMSLEANRGKQKDLIPK 77

  Fly   110 KAKWVKEKALEFDPDNNTVSTSGGKTIKYDFLIIATGLQLNYGKIPGLVEALETPDSNVCSIYSP 174
            .|.|:::|..:|:|..|:|...||..|.||:::||.|:||.|..|.|..|||:||  .|||.|||
 Worm    78 NATWIQDKVQKFEPAKNSVKLRGGDEITYDYMVIAMGVQLRYDMIKGAKEALDTP--GVCSNYSP 140

  Fly   175 KYVDHVYECLRRTNKGNAIFTFPNCPIKCAGAPQKIAYISEHYFRKMGRRDNVNIIYNTSLPVI- 238
            .||:..|:.......|||::||||.||||||||||..||::...|:.|.||..::||.|||..: 
 Worm   141 FYVEKHYKEAMNFKGGNALYTFPNTPIKCAGAPQKACYITDSILRQRGVRDQAHMIYATSLKRVR 205

  Fly   239 ------------------------------------------------FGVKHYAEALMKLIKRR 255
                                                            ||::.|.::|.|:.:.:
 Worm   206 FLLCWDIINHGAIGNQKSKKKIRKHQLVTIDCFDNNILKQYNNFFFHLFGIESYLKSLEKVARDK 270

  Fly   256 NITLNVQRNLVEVRHKDNIAVFEDL---AKP-GVHYEETYSMLHVTPPMSTPDVVANCKKLVTPT 316
            .|.:..:|||:||...|.||.||.|   ||| |...:..||:||:.||.|||:.:.| ...|..|
 Worm   271 EIDVRTRRNLIEVNTNDRIATFELLDEEAKPTGKTEQIEYSLLHIGPPCSTPEALRN-SAFVDKT 334

  Fly   317 GFVDVDQLTLQHNKYSNVFAIGDSASSPNSKTAAAAAAQSPVVFKNVMAAIEGKAPTDIYDGYSS 381
            ||:|||..:||..||.|||.:||..::||:|||||.::....:.||:...::|..|...||||:|
 Worm   335 GFMDVDGGSLQSKKYPNVFGVGDCMNTPNAKTAAAVSSHLKTIEKNLTQVMQGNRPCMQYDGYAS 399

  Fly   382 CPIVTGYSSCILAEFDYNLTP---VETFPLDQSKERYSMFFMKKELMPVLYWKLMMNGYWNGPAL 443
            ||:|...:..|||||.    |   :||.|.||||..|..:.||:..||.|||..::.|||||||.
 Worm   400 CPLVVSTNRVILAEFG----PRGAMETTPFDQSKPTYWAYLMKRYFMPALYWNGLIKGYWNGPAT 460

  Fly   444 MRKIFSVLK 452
            :|....::|
 Worm   461 LRNCTRLVK 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14997NP_647877.1 Pyr_redox_2 59..342 CDD:285266 129/335 (39%)
sqrd-1NP_001255798.1 FadH2 28..>377 CDD:223523 135/351 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166461
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10921
Inparanoid 1 1.050 363 1.000 Inparanoid score I1272
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62271
OrthoDB 1 1.010 - - D1267127at2759
OrthoFinder 1 1.000 - - FOG0005877
OrthoInspector 1 1.000 - - otm14546
orthoMCL 1 0.900 - - OOG6_102907
Panther 1 1.100 - - LDO PTHR10632
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R564
SonicParanoid 1 1.000 - - X4272
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.940

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