Protein Alignment Sqor and sqrd-1

DIOPT Version :10

• Sequence 1: NP_647877.1
• Gene: Sqor / 38514
• FlyBaseID: FBgn0035515
• Length: 457
• Species: Drosophila melanogaster
• Sequence 2: NP_001255798.1
• Gene: sqrd-1 / 178374
• WormBaseID: WBGene00008538
• Length: 471
• Species: Caenorhabditis elegans
• Alignment Length: 464
• Identity: 186/464 - (40%)
• Similarity: 260/464 - (56%)
• Gaps: 63/464 - (13%)

  Fly    45 QVLVVGGGTGGCAMAAKLSSRLGSDKVVVLEPEDKHYYQPMFTLIGGGMKRLDQSHRQMADVLPT 109
            ::||||||.||...|:|.:.:|....|.::||.:.|||||.|||:|||:..|:.:..:..|::|.
 Worm    13 KLLVVGGGAGGLGAASKFARKLPRGSVGIIEPREDHYYQPGFTLVGGGLMSLEANRGKQKDLIPK 77

  Fly   110 KAKWVKEKALEFDPDNNTVSTSGGKTIKYDFLIIATGLQLNYGKIPGLVEALETPDSNVCSIYSP 174
            .|.|:::|..:|:|..|:|...||..|.||:::||.|:||.|..|.|..|||:||  .|||.|||
 Worm    78 NATWIQDKVQKFEPAKNSVKLRGGDEITYDYMVIAMGVQLRYDMIKGAKEALDTP--GVCSNYSP 140

  Fly   175 KYVDHVYECLRRTNKGNAIFTFPNCPIKCAGAPQKIAYISEHYFRKMGRRDNVNIIYNTSLPVI- 238
            .||:..|:.......|||::||||.||||||||||..||::...|:.|.||..::||.|||..:
 Worm   141 FYVEKHYKEAMNFKGGNALYTFPNTPIKCAGAPQKACYITDSILRQRGVRDQAHMIYATSLKRVR 205

  Fly   239 ------------------------------------------------FGVKHYAEALMKLIKRR 255
                                                            ||::.|.::|.|:.:.:
 Worm   206 FLLCWDIINHGAIGNQKSKKKIRKHQLVTIDCFDNNILKQYNNFFFHLFGIESYLKSLEKVARDK 270

  Fly   256 NITLNVQRNLVEVRHKDNIAVFEDL---AKP-GVHYEETYSMLHVTPPMSTPDVVANCKKLVTPT 316
            .|.:..:|||:||...|.||.||.|   ||| |...:..||:||:.||.|||:.:.| ...|..|
 Worm   271 EIDVRTRRNLIEVNTNDRIATFELLDEEAKPTGKTEQIEYSLLHIGPPCSTPEALRN-SAFVDKT 334

  Fly   317 GFVDVDQLTLQHNKYSNVFAIGDSASSPNSKTAAAAAAQSPVVFKNVMAAIEGKAPTDIYDGYSS 381
            ||:|||..:||..||.|||.:||..::||:|||||.::....:.||:...::|..|...||||:|
 Worm   335 GFMDVDGGSLQSKKYPNVFGVGDCMNTPNAKTAAAVSSHLKTIEKNLTQVMQGNRPCMQYDGYAS 399

  Fly   382 CPIVTGYSSCILAEFDYNLTP---VETFPLDQSKERYSMFFMKKELMPVLYWKLMMNGYWNGPAL 443
            ||:|...:..|||||.    |   :||.|.||||..|..:.||:..||.|||..::.|||||||.
 Worm   400 CPLVVSTNRVILAEFG----PRGAMETTPFDQSKPTYWAYLMKRYFMPALYWNGLIKGYWNGPAT 460

  Fly   444 MRKIFSVLK 452
            :|....::|
 Worm   461 LRNCTRLVK 469

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sqor	NP_647877.1	FadH2	65..387	CDD:440215	146/374 (39%)
sqrd-1	NP_001255798.1	FadH2	32..370	CDD:440215	133/340 (39%)