DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ras64B and Rap1a

DIOPT Version :10

Sequence 1:NP_523917.2 Gene:Ras64B / 38494 FlyBaseID:FBgn0003206 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001005765.1 Gene:Rap1a / 295347 RGDID:1359694 Length:184 Species:Rattus norvegicus


Alignment Length:191 Identity:94/191 - (49%)
Similarity:136/191 - (71%) Gaps:9/191 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MQTYKLVVVGGGGVGKSAITIQFIQSYFVTDYDPTIEDSYTKQCNIDDVPAKLDILDTAGQEEFS 67
            |:.|||||:|.|||||||:|:||:|..||..|||||||||.||..:|.....|:||||||.|:|:
  Rat     1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFT 65

  Fly    68 AMREQYMRSGEGFLLVFALNDHSSFDEIPKFQRQILRVKDRDEFPMLMVGNKCDLKHQQQVSLEE 132
            |||:.||::|:||.||:::...|:|:::...:.|||||||.::.||::|||||||:.::.|..|:
  Rat    66 AMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQ 130

  Fly   133 AQNTSRN-LMIPYIECSAKLRVNVDQAFHELVRIVRKFQIAERPFIEQDYKKKGKRKCCLM 192
            .||.:|. ....::|.|||.::||::.|::|||     ||..:..:|   |||.|:|.||:
  Rat   131 GQNLARQWCNCAFLESSAKSKINVNEIFYDLVR-----QINRKTPVE---KKKPKKKSCLL 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ras64BNP_523917.2 M_R_Ras_like 4..167 CDD:133345 83/163 (51%)
Rap1aNP_001005765.1 Rap1 3..167 CDD:133375 85/168 (51%)
Effector region. /evidence=ECO:0000305 32..40 7/7 (100%)

Return to query results.
Submit another query.