DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ras64B and ssr-2

DIOPT Version :10

Sequence 1:NP_523917.2 Gene:Ras64B / 38494 FlyBaseID:FBgn0003206 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_508490.4 Gene:ssr-2 / 191965 WormBaseID:WBGene00006055 Length:335 Species:Caenorhabditis elegans


Alignment Length:166 Identity:59/166 - (35%)
Similarity:95/166 - (57%) Gaps:8/166 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QTYKLVVVGGGGVGKSAITIQFIQSYFVTDYDPTIEDSYTKQCNIDDVPAKLDILDTAGQEEFSA 68
            :.|:|||:|...|||:.|..:::.:.|.:.|..||||.::::..|..||..||||||  ...|..
 Worm    19 ERYRLVVLGSAKVGKTNIIRRYLYNEFSSKYKETIEDLHSREFRIQGVPLPLDILDT--NFNFPD 81

  Fly    69 MREQYMRSGEGFLLVFALNDHSSFDEIPKFQRQIL-RVKDRDEFPMLMVGNKCDLKHQQQVSLEE 132
            ||...:.|...|||||:::|.:||.|:....::|. |..|.:|.|:::||||||:::::  ..||
 Worm    82 MRRLSIASASAFLLVFSVDDVTSFKEMSDIWQEICSRRSDLNELPIVVVGNKCDVENKK--IYEE 144

  Fly   133 AQNTSRNLM---IPYIECSAKLRVNVDQAFHELVRI 165
            ......|.:   :.|||.|||..:.:...|..|:.:
 Worm   145 TAKAFTNRLSSDVRYIEVSAKDNIRITDVFRTLLEL 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ras64BNP_523917.2 M_R_Ras_like 4..167 CDD:133345 59/166 (36%)
ssr-2NP_508490.4 P-loop containing Nucleoside Triphosphate Hydrolases 22..178 CDD:476819 57/159 (36%)

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