DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ras64B and rap-1

DIOPT Version :10

Sequence 1:NP_523917.2 Gene:Ras64B / 38494 FlyBaseID:FBgn0003206 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_501549.1 Gene:rap-1 / 177709 WormBaseID:WBGene00004307 Length:188 Species:Caenorhabditis elegans


Alignment Length:194 Identity:92/194 - (47%)
Similarity:133/194 - (68%) Gaps:17/194 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MQTYKLVVVGGGGVGKSAITIQFIQSYFVTDYDPTIEDSYTKQCNIDDVPAKLDILDTAGQEEFS 67
            |:.||:||:|.|||||||:|:||:|..||..|||||||||.||..:|.....|:||||||.|:|:
 Worm     1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFT 65

  Fly    68 AMREQYMRSGEGFLLVFALNDHSSFDEIPKFQRQILRVKDRDEFPMLMVGNKCDLKHQQQVSLEE 132
            |||:.||::|:||:||:::...|:|:::...:.|||||||.||.||::|||||||:.::.|..::
 Worm    66 AMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMILVGNKCDLEDERVVGKDQ 130

  Fly   133 AQNTSRNLMIPYIECSAKLRVNVDQAFHELVRIVRKFQIAERPFIEQDYKKKGKR------KCC 190
            .||.:|.....::|.|||.::||.:.|::|||     ||..|      |.:.|:|      :||
 Worm   131 GQNLARQFGSAFLETSAKAKINVSEVFYDLVR-----QINRR------YPESGRRQGQSNKQCC 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ras64BNP_523917.2 M_R_Ras_like 4..167 CDD:133345 83/162 (51%)
rap-1NP_501549.1 Rap1 3..166 CDD:133375 85/167 (51%)

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