DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14990 and snk

DIOPT Version :10

Sequence 1:NP_647856.2 Gene:CG14990 / 38486 FlyBaseID:FBgn0035496 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:253 Identity:70/253 - (27%)
Similarity:106/253 - (41%) Gaps:38/253 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 TP---GQFPWVVAL-FSQG--------KYFGAGSLIAPEVVLTAASIVVGKTDAEIVVRAGEWNT 120
            ||   |.||.:.|| ::||        |:...|:|::...|||||......:....:||.|....
  Fly   190 TPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLGARQL 254

  Fly   121 GQRSEFLPSEDRPVARVVQHREFSYLLGANNIALLFLANPFELKSHIRTICLPSQGRSFDQKRCL 185
            .:.|  ...:|..:..:|.|.::......::||||.|....:....:|..|| .|.........:
  Fly   255 NETS--ATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACL-WQLPELQIPTVV 316

  Fly   186 VTGWGKVAFNDENYSNIQKKIELPMINRAQCQDQLRNTRLGVSFDLPASLI----CAG---GEKD 243
            ..|||:..|.... ||..::::|.::.:..|:...|..|     .||..:|    |||   |.:|
  Fly   317 AAGWGRTEFLGAK-SNALRQVDLDVVPQMTCKQIYRKER-----RLPRGIIEGQFCAGYLPGGRD 375

  Fly   244 AGDCLGDGGSALFCPMEADPSRYE----QAGIVNWGIGCQEENVPAVYTNVEMFRDWI 297
            .  |.||.|.    |:.|....|.    ..||.::|..|...|.|.|||.:..:.|||
  Fly   376 T--CQGDSGG----PIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14990NP_647856.2 Tryp_SPc 67..300 CDD:238113 70/253 (28%)
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 70/253 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.