DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14990 and psh

DIOPT Version :10

Sequence 1:NP_647856.2 Gene:CG14990 / 38486 FlyBaseID:FBgn0035496 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:267 Identity:77/267 - (28%)
Similarity:108/267 - (40%) Gaps:43/267 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 NGLVANV--KVPKDYSTPGQFPWVVAL--FSQGKYFG-AGSLIAPEVVLTAASIVVGKTDAEIVV 113
            |.||.::  ..|.|   ||.:|.:.|:  .:.|..|. .|||||...|||||..|....:....|
  Fly   138 NQLVIHIVGGYPVD---PGVYPHMAAIGYITFGTDFRCGGSLIASRFVLTAAHCVNTDANTPAFV 199

  Fly   114 RAGEWNTGQRSEFLPSEDRPVARVVQHREF---SYLLGANNIALLFLANPFELKSHIRTICL--- 172
            |.|..|......  ..:|..:..|..|.::   .|    |:||:|.|........:||..||   
  Fly   200 RLGAVNIENPDH--SYQDIVIRSVKIHPQYVGNKY----NDIAILELERDVVETDNIRPACLHTD 258

  Fly   173 ----PSQGRSFDQKRCLVTGWGKVAFNDENYSNIQKKIELPMINRAQCQ-------DQLRNTRLG 226
                ||..:.|      |.|||.:.......|.|..:..|.::...||.       ..:|..:.|
  Fly   259 ATDPPSNSKFF------VAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQG 317

  Fly   227 VSFDLPASLICAGGEKDAGD-CLGDGGSALFCPMEADPSRYEQAGIVNWGIGCQEENVPAVYTNV 290
            | .|   ||:||..:|...| |.||.|..|...:..:...|...|:::.|.||... .|.:||.|
  Fly   318 V-ID---SLLCAIDQKLIADACKGDSGGPLIHELNVEDGMYTIMGVISSGFGCATV-TPGLYTRV 377

  Fly   291 EMFRDWI 297
            ..:.|:|
  Fly   378 SSYLDFI 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14990NP_647856.2 Tryp_SPc 67..300 CDD:238113 72/252 (29%)
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 74/261 (28%)
Blue background indicates that the domain is not in the aligned region.

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