DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11594 and RPT6A

DIOPT Version :10

Sequence 1:NP_647848.2 Gene:CG11594 / 38473 FlyBaseID:FBgn0035484 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_568389.1 Gene:RPT6A / 832121 AraportID:AT5G19990 Length:419 Species:Arabidopsis thaliana


Alignment Length:227 Identity:43/227 - (18%)
Similarity:85/227 - (37%) Gaps:46/227 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 GQSIAGHLLDHVLKSHESYAELKSQLGEDKFIYQHLNKLLPELAAARG----LSQVGCLTQDV-- 380
            |:.:..:.|.|:   ||...:|:.:......:....|:|...:...|.    |.:.|....:|  
plant    29 GEGLKQYYLQHI---HELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVK 90

  Fly   381 -----HVWPDLHGNRSPIADPTLRGVITGLDMTRGTES--LAIKYLAFVQALAYGTR-HIIENLY 437
                 .|...:|.....:.|     :...:|:|:.|.|  :|::..::|..|...:: ..:.||.
plant    91 VMGKNKVLVKVHPEGKYVVD-----IDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLM 150

  Fly   438 QYGRAPFQTLLFCGGLAKNPLYVQCHADICNLPALIPD--------EQEMVLV------GAAALG 488
            :..:.|..|....|||.:....::   ::..||...|:        :.:.||:      |...|.
plant   151 KVEKVPDSTYDMIGGLDQQIKEIK---EVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212

  Fly   489 AAASGHFD-------SLESASKSMGGTGQLVK 513
            .|.:.|.|       ..|...|.:|...::|:
plant   213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVR 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11594NP_647848.2 5C_CHO_kinase 6..540 CDD:273552 43/227 (19%)
RPT6ANP_568389.1 PRK03992 36..413 CDD:179699 42/220 (19%)

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